Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00895 ATGCCTTCTTCTTGCTTGAGTTCAAGTATCTATGGCGAAAACATCAACAATAACAACATCAACAGTGAGAATAAGAAGAAGAAGAAAAACGATGGTTGTTCTGTTCGTGAATTCAAGCTGAACGAGTCAACATTTTTGGCTTCACTGATGCCGAAGAAAGAGATTGGTGTAGATCGATTCCTTGTTGCTAATCCTGAATACGATGGTCGCGGTGCTCTCATCGCTATCTTTGATTCCGGCGTAGACCCGGCTGCTGATGGATTGCAGATTACCTCAGATGGGAAACCAAAAATTCTTGATATCATTGATTGCACTGGGAGTGGAGATATTGATACCTCAAAGGTGGTGAAGGCTGATGCTGATGGTTGTATTTGTGGGGCATCAGGGGCATCTTTGGTTATCAATACCTCATGGAAAAATCCTTCAGGTGAATGGCATGTGGGTTATAAATTGCTTTATGAGCTCTTTACGGAAGAATTGACTTCTCGTTTGAAGAAAGAAAGAAAGAAAAAATGGGATGAGAAAAACTGGGAGGAAATTGCGAGGGTTGGAAAACAACTTGAAGATTTTGATCAGCAACACGTCAAGGTGGAGGATGCAAAACGTAAAAGGGCTCATGAAGATCTCCAGAATAGGCTTGATCTTCTGAGATGGCAATCTGAGAGCTATGATGATAAAGGGCCTGTCATAGATGCTGTTGTCTGGCATGATGGAGAGGTCTGGAGGGTTGCACTCGACACGCAAAGTCTTGAGGATGATCCAAATTGTGGGAAACTTGCTAATTTTGTGCCTTTAACTAATTATAGGATTGAGAGGAAGTATGGCGTCTTCAGCAAATTAGATGCTTGTACATTTGTTGTTAATGTCTATAATAATGGGAATGTCTTAAGTGTTGTAGCAGCCAGTTGTTCCCATGGCACCCATGTTGCTGGTATAGCAGCTGCTTTCAACCCGAAGGAGCCCTTGTTGAATGGAGTTGCACCTGGCGCACAATTAATATCTTGTAAAATTGGAGATTCTCGCTTAGATTCAATGGATACTGGAACTGGTTTGATTCGAGCACTGATAGCTGCTGTGGAGCATAAATGCGATCTTATCAACATGAGTTATGGTGAAGCAACATTACTTCCAGACTATGGTCGCTTTGTTGACCTTGTAAATGAAGTGGTGAACAAGCATCGTCTGATATTTGTGAGTGGTGCTGGTAATAGTGGGCCAGGATTGAGCACTGTTATTGCACCTGGTGGTACAACTTCAAGTATTATAGGTGTTGGTGCATATGTTTCTCCTGCTATGGCTGCTGGTGCTCATTGTGTTGTTGAACCTCCATCTAAGGGGTTTGAATACACTTGGTCTAGCCGAGGACCAACAGCGGATGGAGACCTTGGTGTCTGTGTAAGTGCTCCTGGTGGTGCTGTTGCTCCTGTTCCTACATGGACTCTTCAACGGCGCATGATGATGAATGGGACATCGATGGCATCACCATCTGCCTGTGGAGGAACTGCGTTGCTTATTAGTGCAATGAAGGCTGAGGGAATTCCTGTGAGTCCATATAGTGTGAGGAGGGCTCTTGAGAATACCTCAGCTCCCATAGGTGATTTACCTGAGGATAAATTATCCACTGGACAAGGGCTTATGCTGGCTTTTGAATATATACAGAAGTGTCAAAATAATCCATGTGTTTGGTATCAAATAAACATCCAGCAATCTGGAAAAACAAATCGTTCATCACGGGGCATCTACCTTAGAGAGCCTAGAGCTTGCCGGCAATCTACTGAGTGGACAGTGCAAGTTAATCCAAAATTTCATGAAGATGCCAGCAACTTTGAGGAGTTGATTCCATTTGAAGAGCTTATTGAGTTACATTCTACTGAAGAGACTGTTGTGAAGGCCCCTAACTATCTATTGCTCACTCATAATGGTCTCACCTTCAATGTAGTTGTGGATCCTTCCAATTTATGTGATGGTCTTCATTATTATGAGGTCTATGGTATTGACTGTAAAGCTCCATGGCGTGGTCCTCTTTTCAGAATTCCAATTACCATAACTAAGGCCAAGGCTATAACTAACCAGCCTCCACAAGTTTCATTTTCAAATATGTTATTCCAGCCAGGCCATATAGAAAGGAGATACATAGAAGTGCCACACGGTGCATCTTGGGCTGAGGCAACAATGAAAACATCAGGATTTGACACAGCTCGAATTTTTTGTGTGGATGCTGTTCAGATATGCCCATTGCAAAGACCTCTGGAATGGAAGAATGTGGTAACTTTTCCTTCTCCTGCTGCCAAAAGCTTTGCCTTTAGGGTAGTAAGTGGTCAGACATTGGAACTAGTCATTTCTCAGTTTTGGCCAAGTGGCATAGGGAGTCATGAGACTGCCAGTGTGGATTTTGAGGTTGTGTTTCATGGGATAAAAGTCAATCCAGAAGAAGTTTTACTTGATGGTAGTGAAGCACCAGTCAGAATTGATGCTGAAACTCTACTGGTATCTGAGGAGCTAGCACCTGTGGCTATTCTAGACATGATTAGGGTCCCATACCGACCAATAGATTCTAAGATTAGTATACTTTCAACAGATCGTGACAAACTTCCCTCTGGAAAGCAGATACTGGCACTGACTTTGACCTACAAGGTTAAATTGGAAGATGGAGCTGAAGTAAAACCTCACATACCGTTGTTAAATTACCGCATACATGACACTAAATTTGAGTCTCAATTTTATGTGATTTCAGACTCAAATAAGCGTGTATATTCATGTGGAGATGCCTATCCAATCTCTTCAGATCTTCCCAAGGGAGAATATACTTTACAGCTATATTTGAGGCATGACAATGTGCAGATTTTGGAAAAGATGAGGCATTTGGTGTTATTCATTGAGCGAAATTTGGAAGAGAAGGATGTCATTCAGTTAAGCTTTTTCTCTCAACCCGATGGCTCACTGATGGGAAATGATTCCTTTAATTCCTCATTGTTAGTTCCAGGTATGAAAGAAGGATTATATCTTGGTCCACCACCAAAAGAAAAGCTTCCCAGGAATTCTCCACAAGGGTCTATATTGGTAGGGGCAATTTCATATGGGAAACTAGGGAAAAATGAAAATCCAGAAGAGCACCCTGCATCATATTGTATCTCTTATGTAGTTCCCCCAAATAAGGTTGATGAGTACAAGGGAGAAGGTTATTCCGTATCTTCCAAGAAGACTGCTTCTGAACATTTAAAAGAAGAGGTAAGAGAAGCAAAAATAAAAGTTCTAGGAAGCCTAAAACAAGAAACTGATGAAGAGCGCTTGGAGTGGAAAGAGCTATCTGCCTTGCTTAAATCGGAATATCCAAAGTACACTCCATTTCTTGCAAAGATATTGGAAGGTTTAGTTTTTAGGAGTAATGTCAAAGACATAATCCATCATGATGAAGAGGTGATTGATGCTGCAAATGAGGTGATTAACAGTATTGACCGGGAAGAGTTGGCAAAATTTTTTGGACTAAAATATGATCCAGAATATGAGGAAGCAGAGCAGTGGTTTATCAGGGAAAAGTTTGAGGTAACCCGAGACCAGTTAGCAGAGGCACTGTACCAGAAGGGACTTGCGCTTGCAGAGATTGAGTCTTTAAAGGACGTAGATGAGTCCTCAGCTTTGGCTGCAACAGAAAGTGCAAAAAAGAACGTGGACAATGAGCAATCTACAGATGATGGCAGCCATCGAGATTTGTTTGAAGAGAATTTTCAAGAACTGAAGAAATGGGTTGATGTGAAGTATTATAAATATGGAATCCTCTTAGTAACACGTGAGAGGCGTTCTCAAAGGCTTGGGACAGCATTGAAGGTACTGTGTGACATAATTCAAGGAGATGCAGAACCTGCCAAGAAGGAATTCTATGAACTAAAGCTCTCTTTGCTTGATGAGATTGGATGGACACATTTAGCTACATATGAGAGACAGTGGATGCTTGTGCGTTTCCCTCCAAGCTTGCCCCTTTTCTAG 3984 0.4187 MPSSCLSSSIYGENINNNNINSENKKKKKNDGCSVREFKLNESTFLASLMPKKEIGVDRFLVANPEYDGRGALIAIFDSGVDPAADGLQITSDGKPKILDIIDCTGSGDIDTSKVVKADADGCICGASGASLVINTSWKNPSGEWHVGYKLLYELFTEELTSRLKKERKKKWDEKNWEEIARVGKQLEDFDQQHVKVEDAKRKRAHEDLQNRLDLLRWQSESYDDKGPVIDAVVWHDGEVWRVALDTQSLEDDPNCGKLANFVPLTNYRIERKYGVFSKLDACTFVVNVYNNGNVLSVVAASCSHGTHVAGIAAAFNPKEPLLNGVAPGAQLISCKIGDSRLDSMDTGTGLIRALIAAVEHKCDLINMSYGEATLLPDYGRFVDLVNEVVNKHRLIFVSGAGNSGPGLSTVIAPGGTTSSIIGVGAYVSPAMAAGAHCVVEPPSKGFEYTWSSRGPTADGDLGVCVSAPGGAVAPVPTWTLQRRMMMNGTSMASPSACGGTALLISAMKAEGIPVSPYSVRRALENTSAPIGDLPEDKLSTGQGLMLAFEYIQKCQNNPCVWYQINIQQSGKTNRSSRGIYLREPRACRQSTEWTVQVNPKFHEDASNFEELIPFEELIELHSTEETVVKAPNYLLLTHNGLTFNVVVDPSNLCDGLHYYEVYGIDCKAPWRGPLFRIPITITKAKAITNQPPQVSFSNMLFQPGHIERRYIEVPHGASWAEATMKTSGFDTARIFCVDAVQICPLQRPLEWKNVVTFPSPAAKSFAFRVVSGQTLELVISQFWPSGIGSHETASVDFEVVFHGIKVNPEEVLLDGSEAPVRIDAETLLVSEELAPVAILDMIRVPYRPIDSKISILSTDRDKLPSGKQILALTLTYKVKLEDGAEVKPHIPLLNYRIHDTKFESQFYVISDSNKRVYSCGDAYPISSDLPKGEYTLQLYLRHDNVQILEKMRHLVLFIERNLEEKDVIQLSFFSQPDGSLMGNDSFNSSLLVPGMKEGLYLGPPPKEKLPRNSPQGSILVGAISYGKLGKNENPEEHPASYCISYVVPPNKVDEYKGEGYSVSSKKTASEHLKEEVREAKIKVLGSLKQETDEERLEWKELSALLKSEYPKYTPFLAKILEGLVFRSNVKDIIHHDEEVIDAANEVINSIDREELAKFFGLKYDPEYEEAEQWFIREKFEVTRDQLAEALYQKGLALAEIESLKDVDESSALAATESAKKNVDNEQSTDDGSHRDLFEENFQELKKWVDVKYYKYGILLVTRERRSQRLGTALKVLCDIIQGDAEPAKKEFYELKLSLLDEIGWTHLATYERQWMLVRFPPSLPLF* 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00895 1327 ProSitePatterns Serine proteases, subtilase family, histidine active site. 305 315 IPR022398 -
Rops5g00895 1327 PRINTS Subtilisin serine protease family (S8) signature 301 314 IPR015500 -
Rops5g00895 1327 PRINTS Subtilisin serine protease family (S8) signature 69 88 IPR015500 -
Rops5g00895 1327 PRINTS Subtilisin serine protease family (S8) signature 488 504 IPR015500 -
Rops5g00895 1327 FunFam Tripeptidyl-peptidase 2 113 174 - -
Rops5g00895 1327 FunFam Tripeptidyl-peptidase 2 homolog 229 559 - -
Rops5g00895 1327 ProSitePatterns Serine proteases, subtilase family, serine active site. 489 499 IPR023828 -
Rops5g00895 1327 Pfam Subtilase family 69 529 IPR000209 GO:0006508|GO:0008236
Rops5g00895 1327 Pfam Tripeptidyl peptidase II 829 1013 IPR022229 -
Rops5g00895 1327 MobiDBLite consensus disorder prediction 1215 1234 - -
Rops5g00895 1327 SUPERFAMILY Subtilisin-like 50 555 IPR036852 GO:0004252|GO:0006508
Rops5g00895 1327 PANTHER PEPTIDASE S8 47 949 - -
Rops5g00895 1327 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 49 531 IPR034051 GO:0006508|GO:0008240
Rops5g00895 1327 Gene3D Peptidase S8/S53 domain 228 559 IPR036852 GO:0004252|GO:0006508
Rops5g00895 1327 Gene3D - 1067 1327 IPR046939 -
Rops5g00895 1327 Gene3D - 113 182 - -
Rops5g00895 1327 FunFam Tripeptidyl-peptidase 2 562 693 - -
Rops5g00895 1327 Gene3D - 562 696 IPR046940 -
Rops5g00895 1327 ProSiteProfiles Serine proteases, subtilase domain profile. 54 552 - -
Rops5g00895 1327 FunFam tripeptidyl-peptidase 2 isoform X1 52 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00895 Rops-Chr5 17350631 17394102 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00895 K01280 - gmx:100798235 2214.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00895 5 17350631 17394102 Rops5g00895 5 17350631 17394102 ECH
Rops5g00895 5 17350631 17394102 Rops6g02727 6 48987932 49013593 PCT