Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02679 ATGCGAAAATCTGTGTGGAAGTCAGCTTTTTTCTTTTTCTTTTTAGATTGTGCAGCTGAGCTTCAGTACACTATCCCAAAACAAAGCCATCCCTGCAAGCAGAAGAAGCTGCCTCACAATTGCCCCTGCTCTGTTTGGCTTACCTTAGTAACCTTCACCAACATCACATCAATGAATAAAGTAGTGCTAAAGGTGGAACTAAATGACGACAGAATTAAGAAAAAAGCCATGAAGTCAATCTCTGGTCTTTCAGGGGTTGAGTCAGTTTCTATGGACATGAAGGACCAGAAATTGACCTTGATTGGAGATATAGACCCTGTGCATGCAGTGGGCAAGCTGAGGAAGTTGTGTCACACTGAGATACTCTCAGTTGGACCAGCCAAGGAAACTAAGAAGAAGGAAGAGAAAAAGAAGCCAGAGGAAGAGAAGAAAAAGGATCAAGATCAGAACTTGGCTGGAATTGTGAAGGTCTTTGAAGCCTATCATAATCAGATGACACAACCTCATTACCATTACACAAGTGTGGAAGAGAATCCTAATGCTTGTGTCATTTGCTAA 558 0.4176 MRKSVWKSAFFFFFLDCAAELQYTIPKQSHPCKQKKLPHNCPCSVWLTLVTFTNITSMNKVVLKVELNDDRIKKKAMKSISGLSGVESVSMDMKDQKLTLIGDIDPVHAVGKLRKLCHTEILSVGPAKETKKKEEKKKPEEEKKKDQDQNLAGIVKVFEAYHNQMTQPHYHYTSVEENPNACVIC* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02679 185 SUPERFAMILY HMA, heavy metal-associated domain 58 117 IPR036163 GO:0046872
Rops6g02679 185 Gene3D - 54 130 - -
Rops6g02679 185 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 60 182 - -
Rops6g02679 185 MobiDBLite consensus disorder prediction 127 148 - -
Rops6g02679 185 ProSiteProfiles Heavy-metal-associated domain profile. 58 125 IPR006121 GO:0046872
Rops6g02679 185 Pfam Heavy-metal-associated domain 64 113 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02679 Rops-Chr6 48185852 48187392 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02679 - - gmx:100793345 166.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02679 6 48185852 48187392 Rops6g02679 6 48185852 48187392 ECH
Rops5g01066 5 21708878 21710095 Rops6g02679 6 48185852 48187392 PCT