Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01066 ATGAAGAAAGTAGTGCTAAAGGTGGAACTCTATGATGACAAAATCAAGAAAAAAGCTATGAAATCAGTCTCTGGCCTATCAGGGGTTGAGTCAGTCTCTGTGGACATGAAGGAGCAGAAAATGACTTTAATTGGAGATATTGACCCTGTTCGTGTAGTGGGCAAGTTGAGGAAATTGTGCCATGCTGAAATAGTTTCAGTTGGACCAGCCAAAGAGGAGAAGAAGGAAGAAGCAAAGAAAGAGGATAAGAAGCCAGATGAAGGTAAGAAAAAAGATCCTAAAGATGAATTGGCTGATCTTGTGAAGGCCTATGAAGCATATTATAATCAGATGAGACAGCCATATCCATATTACTATTACAGAACTGTGGAAGACTCTCCTGATGGCTGTATTATCTGCTAA 402 0.398 MKKVVLKVELYDDKIKKKAMKSVSGLSGVESVSVDMKEQKMTLIGDIDPVRVVGKLRKLCHAEIVSVGPAKEEKKEEAKKEDKKPDEGKKKDPKDELADLVKAYEAYYNQMRQPYPYYYYRTVEDSPDGCIIC* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01066 133 Gene3D - 1 73 - -
Rops5g01066 133 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 2 103 - -
Rops5g01066 133 Pfam Heavy-metal-associated domain 7 58 IPR006121 GO:0046872
Rops5g01066 133 ProSiteProfiles Heavy-metal-associated domain profile. 1 68 IPR006121 GO:0046872
Rops5g01066 133 MobiDBLite consensus disorder prediction 68 95 - -
Rops5g01066 133 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01066 Rops-Chr5 21708878 21710095 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01066 - - gmx:100306444 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01066 5 21708878 21710095 Rops5g01066 5 21708878 21710095 ECH
Rops5g01066 5 21708878 21710095 Rops6g02679 6 48185852 48187392 PCT