Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02588 ATGCGGTGGCCGGCGCCACCGGCGAAGAACGCCGGCTTGGGCGTCGCCGCCATGTCATACGTGGCCATCGACTACCTCCGCCACCTCTCCCCGGGGTGGCACTCGCGGCTGCAACCGGCGCTATGGACTCTCCTCGCCCTCGCCGCCGTGACTCGCGTCCCCTCCTACCGGAACTGGTCGGCGGAGTTCCGCGCGGCGGTTCCATTTGTCGCCTCCATGCTGTTCATGCTCGCCGCTCTCCTCTACGAAGCCCTTTCCGTTCGCTCCGTCACCGCGGTGCTCGGCCTCGACTGGCACCGGGATGCACCTCCTCTTCCAGACACTGGTCAATGGTTGCTCCTGGCGTTGAATGAGAAACTTCCTAGTGTAATTGTTGAGATATTAAGAGCTCGTATTATTGGATTGCACCATTTCTTGATGTTGTTTATGATGCTGGCTTTCTCTGTGCTATTTGACTCTGTAAAAGCTCCAGGCCTCGGACTAGGTGCTAGATACATGTTCACCATGGCAGTTGGCCGCCTTCTTCGTGCCATAACTTTTGCATCTACGATTTTGCCATCAGCCCGTCCTTGGTGTGCTGGTTCTCGGTTCAGAGTTCCAGCATATCCTCATCGATGGGCTCAGAAATATTATGTTCCCTATGCTTCAGATCATAATGCTATCAACCAGTTGATAAAGCTAGATGAAGCTTATGTTGACATTGGAAAACCAGTTGGTGACTACCAGCCAGAATGGGGTTCGATGAGCTTTCTAATTGATTTTCTGCGACCCACTGCCTCTGAAGGTCCTTCATGGTACAGTCTGTTAAAGAAAGCTGGAGGTGGCTGCAATGACCTCCTATACAGTGGCCACATGCTTGTTGCTGTACTCACTGCTATGGCTTGGACGGAAGCATATGGAGGTTTCAGTTCAGCTCTTGTATGGCTTCTTGTAATGCACAGTGCCCAGAGAGAAATACGAGAACGTCATCATTACACTGTAGATTGCATTGTAGCCATCTATGTGGGGATCCTCTTGTGGAAGATGACAGGTTTTATCTGGTCACAACAAGGTAGGAGTCTGACTAAGCTTGAGAAGATTCAAAGTAGACTCGTCCAAGCTGCAAAGGACTCGGACATTGATGAAGTGAGGGAGCTTCTCAAAGAAATTGAGTTAAGCAGTCAAGAGAGCAAGAATCAGACTGCAATCAAATATGCACGGTTGTTTCGTTCTGTCACCATTGGCTTTGCACTCACCGTCGTTGTGCTGGCTTTCATATTGACAAGTGATGGATGA 1275 0.5075 MRWPAPPAKNAGLGVAAMSYVAIDYLRHLSPGWHSRLQPALWTLLALAAVTRVPSYRNWSAEFRAAVPFVASMLFMLAALLYEALSVRSVTAVLGLDWHRDAPPLPDTGQWLLLALNEKLPSVIVEILRARIIGLHHFLMLFMMLAFSVLFDSVKAPGLGLGARYMFTMAVGRLLRAITFASTILPSARPWCAGSRFRVPAYPHRWAQKYYVPYASDHNAINQLIKLDEAYVDIGKPVGDYQPEWGSMSFLIDFLRPTASEGPSWYSLLKKAGGGCNDLLYSGHMLVAVLTAMAWTEAYGGFSSALVWLLVMHSAQREIRERHHYTVDCIVAIYVGILLWKMTGFIWSQQGRSLTKLEKIQSRLVQAAKDSDIDEVRELLKEIELSSQESKNQTAIKYARLFRSVTIGFALTVVVLAFILTSDG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02588 424 Coils Coil 373 393 - -
Rops6g02588 424 Pfam PAP2 superfamily C-terminal 275 342 IPR025749 -
Rops6g02588 424 PANTHER SPHINGOMYELIN SYNTHETASE 11 389 IPR045221 GO:0016780
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02588 Rops-Chr6 46554856 46557480 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02588 - - gmx:100818599 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01096 5 22508637 22522307 Rops6g02588 6 46554856 46557480 PCT