Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01096 ATGGTTGATGATGAGTTGGTGACTGTTGACAGTGAGTCTCAAGATGAAAATTTTGATTCAGCTTCTTCTAATAAGGCAGAGGATTGGAAGGAAAATTTGGGGCAGAAATCATCAGAAGTTAGTTCTTCACCTCGAATAGGTTTGGACCATTTCATCACAGAGCCTGCTGGAACTGAGAGGAACCTGCATATTGCTGACCATGAAGTTATGCTTTCTAGATCCATGATGGAGAAATGGGGCTCTCCAAGATGTGACCTAATATTGGACAGGCTGTCAGAGAGTGAGAAGCAAAAGCTGATTGTTAACCTATTGAAGATACAAAATGATGGGACTGTTGAAGTTGATCTAGAAAGAAGTGCACCAGTTGCATCAGAATTGTTGGAGCTGCAATCTTTTGGAGAGTCAACAATGAGCGGAACTCTTATTTCTGAATCAAAAAAATCAGCTCCCTGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGATGTACAACCTTTCCTGGCCATTGCAAGAAAACTTCAGGAGTATGGTCATCATGTTAGGCTGGCAACACATGCTGATTTTGGCACATTTGTAAAGTCTGCTGGTGTAGATTTCTATCCTTTGGGTGGTGATCCTCGTGCTTTGGCAGGATATATGGTGAGGAATAGAGGTTTAATTCCATCTGGTCCTACTGAAATATCCATCCAAAGAAAGCAGCTGAAGGCTATTATTGATTCTCTTCTTCCTGCATGTACAGCACCTGATTTGGAAACTGGTGTTCCTTTCAGAGCTCAGGCTATTATTGCCAATCCTACTGCTTATGGACATGCACATGTTGCTGAAGCCCTTGGAGTGCCCCTACACATCTTTTTCACAATGCCTTGGACGCCAACATATGAGTTCCCACACCCTTTGGCACGTGTTCCTCAAAGTGCTGGTTATTGGCTGTCCTATATAATTGTGGATCTACTGATATGGTGGGGGATACGAGGAATCATCAATGACTTCAGGAAAAGGAAATTAAAGCTTGCTCCTATTGCATACTTTAGCATGTACCATGGATCAGTATCTCATTTACCAACTGCCTATATGTGGAGTCCATATGTTGTTCCAAAACCTAATGACTGGGGCCCTTTAGTTGATGTTGTTGGTTACTGTTTCTTAAACCTTGGATCAAAGTATCAACCACGTGAAGATTTTGTCCGATGGATTCAAAAAGGACCAAAACCTTTATATTTCGGGTTTGGGAGCATGCCTCTTGAAGATCCTAAAAAAACTACTGACATCATAATGGAGGCACTGAAGGATACAAGACAACGGGGAATTATTGACAGGGGCTGGGGAAATCTAGGGAACCTGGCAGAAGTTCCTGACAATGTTTTCCTTCTAGAGGAATGCCCTCATGACTGGTTATTTCCTCAATGTTCTGCAGTGGTGCATCATGGTGGTGCTGGAACAACGGCTACTGGACTAAAAGCAGGGTGTCCAACAACAATCGTTCCATTCTTTGGAGATCAATTCTTTTGGGGTGACAGAATATATCAGAAAGGGCTTGGACCGGCTCCAATCTCAATATCTCAGCTTAGTCTAGAGAATTTATCAAATGCCATAAAATTCATGCTCCAACCAGAGGTGAAATCTCGAGCAATGGAAATTGCTAAGTTGATTGAGAATGAAGATGGTGTAACTGCTGCAGTTGAAGCATTTCACCGCCATCTACCTTCTCAGCTACCACTGCCAACTCCTCCAGTGGAGGAGGACCATGCAAATCCTTTGCAGTGGTTTTTTCTCCAACTTGCAAAGTTATGCAGTTTGCCTTGTGGTGGTGTATAG 1821 0.4278 MVDDELVTVDSESQDENFDSASSNKAEDWKENLGQKSSEVSSSPRIGLDHFITEPAGTERNLHIADHEVMLSRSMMEKWGSPRCDLILDRLSESEKQKLIVNLLKIQNDGTVEVDLERSAPVASELLELQSFGESTMSGTLISESKKSAPWLQIVILVVGTRGDVQPFLAIARKLQEYGHHVRLATHADFGTFVKSAGVDFYPLGGDPRALAGYMVRNRGLIPSGPTEISIQRKQLKAIIDSLLPACTAPDLETGVPFRAQAIIANPTAYGHAHVAEALGVPLHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGIRGIINDFRKRKLKLAPIAYFSMYHGSVSHLPTAYMWSPYVVPKPNDWGPLVDVVGYCFLNLGSKYQPREDFVRWIQKGPKPLYFGFGSMPLEDPKKTTDIIMEALKDTRQRGIIDRGWGNLGNLAEVPDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIYQKGLGPAPISISQLSLENLSNAIKFMLQPEVKSRAMEIAKLIENEDGVTAAVEAFHRHLPSQLPLPTPPVEEDHANPLQWFFLQLAKLCSLPCGGV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01096 606 Gene3D Glycogen Phosphorylase B; 383 552 - -
Rops5g01096 606 CDD GT1_Gtf-like 154 568 IPR002213 GO:0008194
Rops5g01096 606 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 154 569 - -
Rops5g01096 606 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 383 552 - -
Rops5g01096 606 MobiDBLite consensus disorder prediction 1 43 - -
Rops5g01096 606 Gene3D Glycogen Phosphorylase B; 154 557 - -
Rops5g01096 606 Pfam Glycosyltransferase family 28 N-terminal domain 154 297 IPR004276 GO:0005975|GO:0016758|GO:0030259
Rops5g01096 606 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 408 551 IPR002213 GO:0008194
Rops5g01096 606 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 25 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01096 Rops-Chr5 22508637 22522307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01096 175 606 Glycosyltransferase AT1G43620 78.947 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01096 K05841 - gmx:100797391 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01096 5 22508637 22522307 Rops5g01096 5 22508637 22522307 ECH
Rops5g01096 5 22508637 22522307 Rops6g02588 6 46554856 46557480 PCT