Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02577 ATGGCAGCAAAGCGCGTGTACCAAGTTTGGAAAGGAAGTAATAAATTCATATTTGGAGGGAGGTTGATATTTGGGCCTGATGCTAGGTCCCTGCTTGTCACCTTGTTGCTGATTATTGTTCCAGTCATCATCTTTTGTGTATTTGTAGCGAGGCATCTTCGGCATGAATTTTCTTCATATAATGCAGGATATGCTATTTTAGTAGTGGCAATTCTCTTTACTATTCTCATCCTGGTGCTTCTCTGTCTTACTTCCTCACGTGATCCGGGTATCATTCCAAGGAATTCACATCCACCAGAAGAAGAGTTTCGTTATGATTCTGTTGATGTTGGGGGGACTGGACGACAAACGCCAAGTCTTCAGTTCCCTCGAACAAAAGAAGTAATGGTCAATGGCCATGCTGTAAGAGTGAAATATTGTGAGACTTGTATGCTTTATCGTCCTCCTCGTTGCTCGCATTGCTCCATTTGCAACAACTGTGTGGAGCGTTTTGATCACCATTGTCCTTGGGTGGGCCAATGCATTGGTCTGAGGAACTACCGTTACTTCTTTATGTTTGTTTCTTCGGCAACCATTCTGTGCATCTATGTTTTTTCCTTCTCAGCTTTTTACATCAAGGTTCTGATGAATGATTATGACGGCACAGTTTGGAAGGCAATAAAAGAATCCCCTGCGTCTGTGATACTAATGGCTTATTGTTTCATCTCTCTGTGGTTTGTTGGTGGACTGACTGGTTTTCATTTGTACCTTATAGGCACAAACCAGACTACCTATGAAAACTTCCGGTACAGAGCTGATGGCAGGATCAATGTTTTTAATCGGGGTTGTTTAAATAATTTTCTGGAAGTGTTTTGCACCAAAGTGAAGCCCTCAAGGAACAATTTCAGGGCTTTTGTTCAAGAGGAAGTACAAAGGCCAATGGCTCCAGTCATGCCCCGGGAACGCGAACCAGATGACTTGGGTGGAGATCGCCATGCTAAGGTTGAAGATGATCTAGATATCAGTGAAGACCTATTGAAGATATCACAGCGTAGGAATATCGAAGAACTTGATGAGGACATTCGGAGCAGAGGGAGCAATGGACCGCCACATAATACATCTGAACCTGACTTGATGTTGTCGTCAGATCATCGGGCTCCCACGATTCGATCCGAGGCTAGGCACTCAAGTTGGGAAAGGGGTGTAAGCTGGGAAATTGCACAAGAGGTTCTTGCCAATTCCAATGTCACTGAAAGCAGAAACTATGTCACTTCAAAGGAAATGCGCCAATGA 1272 0.4379 MAAKRVYQVWKGSNKFIFGGRLIFGPDARSLLVTLLLIIVPVIIFCVFVARHLRHEFSSYNAGYAILVVAILFTILILVLLCLTSSRDPGIIPRNSHPPEEEFRYDSVDVGGTGRQTPSLQFPRTKEVMVNGHAVRVKYCETCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATILCIYVFSFSAFYIKVLMNDYDGTVWKAIKESPASVILMAYCFISLWFVGGLTGFHLYLIGTNQTTYENFRYRADGRINVFNRGCLNNFLEVFCTKVKPSRNNFRAFVQEEVQRPMAPVMPREREPDDLGGDRHAKVEDDLDISEDLLKISQRRNIEELDEDIRSRGSNGPPHNTSEPDLMLSSDHRAPTIRSEARHSSWERGVSWEIAQEVLANSNVTESRNYVTSKEMRQ* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02577 423 MobiDBLite consensus disorder prediction 350 375 - -
Rops6g02577 423 MobiDBLite consensus disorder prediction 308 327 - -
Rops6g02577 423 ProSiteProfiles DHHC domain profile. 138 188 - -
Rops6g02577 423 Pfam DHHC palmitoyltransferase 137 262 IPR001594 GO:0016409
Rops6g02577 423 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 37 304 - -
Rops6g02577 423 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02577 Rops-Chr6 46414772 46420851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02577 65 284 Lipid Metabolism Gene Families AT4G22750 28.814 2.85e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02577 K16675 - gmx:100820208 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01116 5 22991350 23023727 Rops6g02577 6 46414772 46420851 PCT