Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02566 ATGGCTCCGACTAGCAAGGCCGAGAAGAAGGAAGCAGTAGATGCAGCCGCATGGGTGTTCAATGTTGTCACTTCTGTTGGAATTATCATTGTAAACAAAGCTTTGATGGCTACTTATGGCTTCAGTTTTGCTACAACATTAACTGGTCTTCATTTTGCTACTACAACTTTGATGACTGCGATTCTAAGGATGCTGGGATATGTCCAGCCTTCTCATTTACCCTTGCCAGAACTTCTGAAATTTGTTCTCTTTGCTAACTTCTCTATTGTTGGAATGAATGTCAGTCTAATGTGGAACTCGGTTGGATTCTATCAAATTGCTAAGTTGAGTATGATCCCTGTATCCTGCCTGTTGGAAGTTGTTTTGGACAAGATTCGGTATTCAAGAGACACAAAATTGAGCATAGGTGTCGTTCTTTTGGGCGTTGGTGTTTGCACTGTTACTGATGTGAGTGTCAATGCAAGAGGTTTCATTGCTGCCTTTATAGCAGTGTGGAGCACTTCTCTGCAACAATATTATGTTCATTTTCTTCAACGGAAGTATTCTCTAAGTTCTTTCAACCTTTTGGGACATACAGCACCTGCTCAGGCTGCATCACTACTGTTATTAGGCCCTGTTCTAGACTATTGGTTAACAAACAACAGAGTTGACAAATATGCTTATAATGCAGGCTCTTTGATGTTCATATTTCTGTCATGCACTATTGCAGTTGGGACCAACCTCAGCCAATTTATCTGCATTGGCAGATTCACTGCTGTTTCTTTTCAAGTACTAGGCCATATGAAGACAATACTTGTTCTGGTATTGGGGTTCTTTTTCTTTGGGAGGGAGGGTCTAAATCTTCAAGTGGTTTTAGGGATGGTAATAGCTGTGGTTGGAATGATATGGTATGGCAATGCCTCATCAAAGCCTGGTGGAAAGGAGCGCTGGAGTCACTCTCTACCCACCAACAAAACTGAAACCCGGTAG 969 0.419 MAPTSKAEKKEAVDAAAWVFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTLMTAILRMLGYVQPSHLPLPELLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVLDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNARGFIAAFIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQAASLLLLGPVLDYWLTNNRVDKYAYNAGSLMFIFLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLVLGFFFFGREGLNLQVVLGMVIAVVGMIWYGNASSKPGGKERWSHSLPTNKTETR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02566 322 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Rops6g02566 322 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
Rops6g02566 322 MobiDBLite consensus disorder prediction 302 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02566 Rops-Chr6 46278860 46283468 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02566 18 320 Organic Solute Cotransporters AT1G21870 25.312 9.52e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02566 K26224 - gmx:100786437 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01130 5 23331384 23338083 Rops6g02566 6 46278860 46283468 PCT