Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01130 ATGGCTCCGGCTAGCAAGGCTGAGAAGAAGGCTGCGGTTGATGCAGCTGCATGGATGTTCAATGTTGTTACTTCTGTTGGAATTATCATTGTAAACAAAGCTTTGATGGCCACTTATGGCTTCAGTTTTGCTACAACGTTAACAGGTCTGCACTTTGCTACTACAACTGTAATGACAGTCATACTAAGGATGTTGGGATATGTCCAGGCTTCTCATTTACCCTTGCCAGATCTTCTAAAATTTGTTCTCTTTGCTAACTTCTCCATTGTTGGAATGAATGTTAGTCTAATGTGGAACTCAGTCGGATTCTATCAAATTGCAAAGTTAAGTATGATCCCTGTATCTTGCCTACTGGAAGTTGTTTTTGACAAGATTCGGTATTCAAGAGACACAAAACTAAGCATAGGTGTCGTTCTTTTGGGTGTTGGTGTTTGCACTGTTACTGATGTGAGTGTTAATACAAGAGGATTCATCGCTGCCTTTATAGCAGTATGGAGCACTTCTTTGCAACAATATTATGTTCATTTTCTTCAACGGAAGTATTCACTAAGTTCTTTCAACCTATTGGGTCATACAGCACCTGCACAAGCAGCATCACTACTGTTGTTAGGACCTTTTCTAGATTATTGGTTGACAAACAAAAGAGTTGACAGATTTGAGTACAACACTGCCTCTTTGATGTTCATATTTATGTCATGCACTATTGCAGTTGGTACCAACCTCAGCCAATTTATCTGCATTGGCAGATTCACTGCTGTTTCTTTTCAAGTACTGGGACATATGAAGACAATACTTGTTCTAATCATGGGGTTCTTTTTCTTTGGGAAAGAGGGTCTCAATCTCCAAGTGGTATTTGGAATGGTCATAGCTGTGGCTGGAATGATTTGGTATGGCAATGCTTCATCAAAGCCTGGTGGAAAGGAACGTAGGAGTCACACTCTCCCTACCAACAGAACAGAAACAAGATAG 969 0.4035 MAPASKAEKKAAVDAAAWMFNVVTSVGIIIVNKALMATYGFSFATTLTGLHFATTTVMTVILRMLGYVQASHLPLPDLLKFVLFANFSIVGMNVSLMWNSVGFYQIAKLSMIPVSCLLEVVFDKIRYSRDTKLSIGVVLLGVGVCTVTDVSVNTRGFIAAFIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQAASLLLLGPFLDYWLTNKRVDRFEYNTASLMFIFMSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLIMGFFFFGKEGLNLQVVFGMVIAVAGMIWYGNASSKPGGKERRSHTLPTNRTETR* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01130 322 PANTHER SOLUTE CARRIER FAMILY 35 17 301 - -
Rops5g01130 322 MobiDBLite consensus disorder prediction 305 322 - -
Rops5g01130 322 MobiDBLite consensus disorder prediction 302 322 - -
Rops5g01130 322 Pfam Triose-phosphate Transporter family 23 297 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01130 Rops-Chr5 23331384 23338083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01130 18 320 Organic Solute Cotransporters AT1G21870 24.762 5.43e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01130 K26224 - gmx:100786437 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01130 5 23331384 23338083 Rops5g01130 5 23331384 23338083 ECH
Rops5g01130 5 23331384 23338083 Rops6g02566 6 46278860 46283468 PCT