Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02216 ATGGCGAAGCTTGTGATTGGTTACTATGGGGTACTTTACCTGTGCTTGATACACACGCAGTTGCATGTACTCGCCATTTTGGACCCAGCAGATTTTCTGGCTTTACAATCCATTCGTAAGGCTCTGGAAGACATGCCAGGTTCTGATTTCTTTTCTTCATGGGATTTCACTGCTGACCCTTGCAACTTCGCTGGTGTTTTATGTGATTCCGATAAGGTCATTGCGCTTAACCTCGGCGATCCCAGGGCTGGTTCGCCTGGTCTCACCGGCCGTCTAGACCCCGCCATTGGAAAGCTCTCTGCTCTCGCTGAGTTCACCGTCGTTCCCGGAAGGATATACGGTCATCTGCCGCAAACCCTTTCCAATCTGAAGAACCTCAGGTTCCTCGGCGTTAACCGGAATTTCATCTCCGGCGACATTCCGGCGGGGTTGGATGGTTTGCGTAACCTCCGAACCATTGATCTCAGCTACAACCAGCTCACCGGACGCATTCCTCCGTCGGTTGGATCCTCGCCGGAGCTAACAAACCTCATCCTCTGCCACAACCGTCTCTCCGGTTCGGTTCCCCGGTTCGAGTCACAGACCCTGACCCGATTGGACCTCAAGCACAACGATCTCTCCGGTTCGCTCGGTCCAAACTCTCTCCCTCCGTCTCTGCAGTACCTCTCCCTGTCGTGGAACAAGCTGAATGGGCCGATGGACCGGATCTTGGGCCGGATGGACCAGCTGAACTATCTGGACCTTAGCCTGAACCAGTTCACGGGCCCAATCCCGGCCCGGATCTTCTCGTTCCCTTTAACCAATCTCCAATTAGAAAGGAACCAGTTCTCCGGACCGATCGAACCGGTTGATCAGGTGACAATCTCAACCGTGGATCTCAGTTACAACCGTTTGTCAGGTCAAATATCGCCAATGTTAGCGAGCGTGCAGAACCTGTACTTGAACAATAACCGGTTCACGGGTCGGGTCCCGGCTAGCTTCGTGGACCGGTTACTGGACGCTAGCATTCAGATACTGTATTTGCAACACAATTATCTTACGGGAATTGAAATAAGCCCAACGGCGGTGATTCCAGAGAGAAGCTCACTGTGTCTGCAGTATAATTGCATGGTCCCGCCCGTACAGACACCTTGCCCCTTGAGGGCTGGCCAGCAGATAACAAGGCCTACTGCACAGTGCAACCAATGGAAAGCTGAGGAGCCTCATTAG 1209 0.531 MAKLVIGYYGVLYLCLIHTQLHVLAILDPADFLALQSIRKALEDMPGSDFFSSWDFTADPCNFAGVLCDSDKVIALNLGDPRAGSPGLTGRLDPAIGKLSALAEFTVVPGRIYGHLPQTLSNLKNLRFLGVNRNFISGDIPAGLDGLRNLRTIDLSYNQLTGRIPPSVGSSPELTNLILCHNRLSGSVPRFESQTLTRLDLKHNDLSGSLGPNSLPPSLQYLSLSWNKLNGPMDRILGRMDQLNYLDLSLNQFTGPIPARIFSFPLTNLQLERNQFSGPIEPVDQVTISTVDLSYNRLSGQISPMLASVQNLYLNNNRFTGRVPASFVDRLLDASIQILYLQHNYLTGIEISPTAVIPERSSLCLQYNCMVPPVQTPCPLRAGQQITRPTAQCNQWKAEEPH* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02216 402 Gene3D Ribonuclease Inhibitor 30 192 IPR032675 -
Rops6g02216 402 Pfam Leucine Rich repeat 193 208 IPR001611 GO:0005515
Rops6g02216 402 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 19 397 - -
Rops6g02216 402 Gene3D Ribonuclease Inhibitor 193 376 IPR032675 -
Rops6g02216 402 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Rops6g02216 402 Pfam Leucine Rich Repeat 149 168 IPR001611 GO:0005515
Rops6g02216 402 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 93 188 - -
Rops6g02216 402 SUPERFAMILY L domain-like 52 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02216 Rops-Chr6 40592894 40594583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02216 26 348 Receptor kinase-like Gene Family AT3G51740 33.056 1.25e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02216 - - gmx:100800224 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02216 6 40592894 40594583 Rops6g02216 6 40592894 40594583 ECH
Rops8g02949 8 66178443 66179788 Rops6g02216 6 40592894 40594583 PCT