Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g02185 ATGGGAGTTGTCACTGTGGGAGAATTGAAACCCAGCATTTCAGGGAAGAGAACCTTTCGTCCAAGTTCAAGCATAAGGCATGCCACTGAATGGCCGATATCTGATGTCTCTAGTGATCTTACCATCGAAGTAGGAGCTTCTTGCTTTGCACTTCACAAGTTTCCCCTAGTTTCTAGGAGTGGAAGAATTCGGAAACTGCTGTTAGAATCTAAAGATTCTAAAGTTTCACGCATAAGTCTCCCAACAGTGCCCGGAGGTGCAGAGGCATTTGAGCTTGCTGCCAAATTTTGTTATGGAATTAATGTTGAGTTCACCCTCTCCAATGTTGCTATGCTAAGATGTGTAGCCCATTTTCTAGAAATGACAGAAGAATATGCGGAGAAAAACTTGGAGACACGAGCTGAAGCATATCTAAAAGAGACAGTGCTACCAAATATAGCAAGCACAATATCTGTTCTTCACAGATGTGAAACTCTTCTGCCCATTTCAGAAGAGATTAACCTTGTTTGCAGGCTAATCAATGCTATTGCAAATAATGTGTGCAAAGAGCAGCTTACCTCTGGTTTGCAAAAACTGGACCACAACTTCCCTTCTAAAACCATCTCAAACATGGAACCAGAAACACCCTCAGAATGGTGGGGAAAGTCTCTCAATGTTCTTAATCTTGATTTCTTCCAGAGAGTTTTATCTGCGCTAAAGTCAAAGGGACTAAAACAAGAAATTATCAGCAAAATTTTGATAAACTATGCACATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCCCAAGTAGTCAAAGGAAGCTTACTGGACTTAGAATTGCAGAAGAAACAAAGGGTCCTTGTTGAAGCCATAGCTGGTTTACTACCAACTCAATCAAGGAAAAGCCCGGTTCCAATCGCATTTCTCTCAAGTTTGTTGAAAGCAGCAATAGCAGCATCAGCTTCCACTTCTTGCAGATCTGATTTGGAGAGGCGGATTGGTCTACAACTTGATCAGGCAATTCTTGAAGACATCCTAATTCCAACAAACTCACATCAAAATAGCCACAGCACAATTTATGATACAGATTCAATTTTGAGAATTTTTTCAATTTTTCTGAACTTGGATGAAGAGGATGAGGAGGATAGTCGGTTGAGAGATGAAAGTGAAATGGTTTATCACTTTGACAGCCCCGGATCTCCAAAACAAAGCTCAATTCTGAAGGTATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTAGACCCAAACTTGTTGCCATCGAAGTTCATATCACTTGTGGAACTACTTCCTGATCATGCACGGATTATAAGTGATGGACTCTATAGAGCTGTGGATATTTTCCTTAAGGTTCATCCTAACATAAAGGACTCAGAGCGCTACCGCCTCTGCAAAAACATTGATTGCCAGAAACTGACTCAAGAAGCATGCAGCCATGCAGCACAAAATGAAAGGCTACCAGTTCAGACGGCGGTTCAAGTTCTTTACTTTGAGCAAATCAGGCTTCGCAATGCTATGAATGGAGGGCACAATCAATTCTTCTTTGGTGGACTTAATAATCAATTCCCTCAACGTTCAGGTAGTGGTGCAGGAAGTGGAGCCATTTCCCCTAGAGATAACTATGCATCAGTGAGAAGGGAGAACCGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGATCATGTTTCTATGAAGCAGGAGCTTGTAAAGTCCCATCCTGCAAACAAGCTGTTTAAATCATTCACTAAAAAACTGAGCAAGCTGAATGCTCTATTTCGGATAAACAGTATTAAGCCAAATGGTACTAGTTCAGAAAGCCGGTTCCCTTTTCCAAAGAGAAGGCGTCACTCAGTTTCATGA 1890 0.4153 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASCFALHKFPLVSRSGRIRKLLLESKDSKVSRISLPTVPGGAEAFELAAKFCYGINVEFTLSNVAMLRCVAHFLEMTEEYAEKNLETRAEAYLKETVLPNIASTISVLHRCETLLPISEEINLVCRLINAIANNVCKEQLTSGLQKLDHNFPSKTISNMEPETPSEWWGKSLNVLNLDFFQRVLSALKSKGLKQEIISKILINYAHNSLQGMVVRDPQVVKGSLLDLELQKKQRVLVEAIAGLLPTQSRKSPVPIAFLSSLLKAAIAASASTSCRSDLERRIGLQLDQAILEDILIPTNSHQNSHSTIYDTDSILRIFSIFLNLDEEDEEDSRLRDESEMVYHFDSPGSPKQSSILKVSKLLDNYLAEVALDPNLLPSKFISLVELLPDHARIISDGLYRAVDIFLKVHPNIKDSERYRLCKNIDCQKLTQEACSHAAQNERLPVQTAVQVLYFEQIRLRNAMNGGHNQFFFGGLNNQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTKKLSKLNALFRINSIKPNGTSSESRFPFPKRRRHSVS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g02185 629 SUPERFAMILY POZ domain 22 123 IPR011333 -
Rops6g02185 629 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Rops6g02185 629 PANTHER OS12G0117600 PROTEIN 34 588 IPR043454 -
Rops6g02185 629 Pfam NPH3 family 211 479 IPR027356 -
Rops6g02185 629 Gene3D Potassium Channel Kv1.1; Chain A 26 146 IPR011333 -
Rops6g02185 629 Pfam BTB/POZ domain 37 139 IPR000210 GO:0005515
Rops6g02185 629 Coils Coil 543 577 - -
Rops6g02185 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Rops6g02185 629 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g02185 Rops-Chr6 40265195 40269610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g02185 1 453 EF-hand Containing Proteins AT2G47860 59.794 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g02185 - - gmx:100814622 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g02185 6 40265195 40269610 Rops6g02185 6 40265195 40269610 ECH
Rops8g03641 8 76605258 76609206 Rops6g02185 6 40265195 40269610 PCT