Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01586 ATGGAAGTGACAAGTGTTGTTCATTCTTCAGTTGGGTTTCTGCATTTGCAAACACACTCTTCACACCTTGGAAGAAGAAGGCTCAACAGCAGAGCCTTCTTCATCTCCACAAGAACCACAGCACGAAGAAGGAATGCTCCTCTTCCTTGTTACCATCTTCCAAACAACATAAACAAAACAAGTGTCATCATCAACTCCTCCACTTCAGCTACAACTGCTACTTCCACAGCAACTTCAGGGTCCCTGTCTGAGGTGGAAAAGATCAAGCAAAAGTGCCTTACATGGCAGTGGAAGGGTCAATATTCAATCAACTACTTTGTTTCTTCTGATGCAGATTCTCCCCACCCTCCTCTCTTACTTGTACATGGCTTCGGTGCCTCCATTCCTCACTGGCGCAGGAATATCAAGACACTGGCCCAGAATTACACTGTTTATGCTATTGATCTTCTTGGTTTTGGGGCTTCAGATAAGCCTCCAGGCTTTTCATATACCATGGAAACATGGGCTCAGTTGATCCTGGATTTCTTGGATGAAGTTATTCAGAAGCCAACTGTACTAATAGGAAACTCTGTTGGAAGCCTTGCTTGTCTCATTGCTGCCTCAGATTCAAGTCAAACTCTTGTTAGAGGAATTGTGCTGTTAAACTGTGCTGGTGGCATGAACAACAAAGCAATTGTTGATGACTGGAGGATCAAGTTACTATTACCCTTGCTTTGGCTGGTTGATTTTTTATTGAAGCAAAAGGGAATTGCCTCAGCAATTTTTGAACGTGTTAAACAGAGAGAGAATTTGAGGAACGTTTTGAGTTCAGTGTATGGAAATAAGGAGTCTGTGGATGATGAACTGGTGGAGATCATTAGGGAACCGGCAAATGATGCAGGGGCCTTAGATGCATTTGTATCCATTGTAACGGGGCCACCAGGGCCTAATCCAGTGCAGTTGATGCCAAAAATCACCTTGCCTGTTTTACTTTTATGGGGAGATGAAGATCCCTTTACTCCACTTGATGGTCCTGTTGGCAAGTACTTTTCTTCATTGCCTTCTCAAAAAGAAAATGTAAAACTCTTTGTACTTGAAGGGGTTGGGCATTGTCCTCATGATGATAGGCCTGAGTTAGTCCATGAAAAATTGCTTCCCTGGTTGGCCACTCTTTCCAATTCATAG 1164 0.433 MEVTSVVHSSVGFLHLQTHSSHLGRRRLNSRAFFISTRTTARRRNAPLPCYHLPNNINKTSVIINSSTSATTATSTATSGSLSEVEKIKQKCLTWQWKGQYSINYFVSSDADSPHPPLLLVHGFGASIPHWRRNIKTLAQNYTVYAIDLLGFGASDKPPGFSYTMETWAQLILDFLDEVIQKPTVLIGNSVGSLACLIAASDSSQTLVRGIVLLNCAGGMNNKAIVDDWRIKLLLPLLWLVDFLLKQKGIASAIFERVKQRENLRNVLSSVYGNKESVDDELVEIIREPANDAGALDAFVSIVTGPPGPNPVQLMPKITLPVLLLWGDEDPFTPLDGPVGKYFSSLPSQKENVKLFVLEGVGHCPHDDRPELVHEKLLPWLATLSNS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01586 387 SUPERFAMILY alpha/beta-Hydrolases 90 381 IPR029058 -
Rops6g01586 387 FunFam Predicted protein 81 383 - -
Rops6g01586 387 Gene3D alpha/beta hydrolase 58 383 IPR029058 -
Rops6g01586 387 PRINTS Alpha/beta hydrolase fold signature 141 156 IPR000073 -
Rops6g01586 387 PRINTS Alpha/beta hydrolase fold signature 322 336 IPR000073 -
Rops6g01586 387 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 46 384 - -
Rops6g01586 387 Pfam Alpha/beta hydrolase family 118 374 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01586 Rops-Chr6 32789471 32792058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01586 118 384 Miscellaneous Gene Families AT1G80280 25.347 6.71e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01586 - - gmx:100775473 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00679 5 12129932 12130510 Rops6g01586 6 32789471 32792058 PCT