Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01579 ATGGCCTCATCATGTGTGGGTACTTTATCACCCAACCAATCTCTACTTTTCTCACAAACCAAACACTCAGCTACTCCTGTAAGTACAACTGGTACCTGGGTAACTTTTCCTTCAACAAGGAGGAGAGTAGTAGTAAGAGCAGACAGTGTGACTAATGTAATAGAGAAACTGGGCATCAAGATTGAGAGGAACCCTCCTGAGTCCAAGCTCACTCAACTTGGTGTCAGGCAGTGGCCCAAATGGGGTTGCCCTCCAAGCAAATTCCCATGGACATATGAAGCCACGGAGACTTGCTATCTTTTGGAAGGAGAAGTGAAGGTTACTCCTAGTGGGGTGAATGAGGCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTGTCTGTTGGTGTGGACAAGCACTACAAATTTGAATAA 444 0.4572 MASSCVGTLSPNQSLLFSQTKHSATPVSTTGTWVTFPSTRRRVVVRADSVTNVIEKLGIKIERNPPESKLTQLGVRQWPKWGCPPSKFPWTYEATETCYLLEGEVKVTPSGVNEAVEIAAGDLVVFPKGMSCTWDVSVGVDKHYKFE* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01579 147 Pfam EutQ-like cupin domain 71 144 IPR008579 -
Rops6g01579 147 CDD cupin_TM1112-like 78 146 - -
Rops6g01579 147 Gene3D Jelly Rolls 45 146 IPR014710 -
Rops6g01579 147 PANTHER OS04G0445200 PROTEIN 18 147 - -
Rops6g01579 147 SUPERFAMILY RmlC-like cupins 66 144 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01579 Rops-Chr6 32760493 32762290 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01579 K06995 - gmx:100499968 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00689 5 12215159 12217239 Rops6g01579 6 32760493 32762290 PCT