Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00689 ATGAGTAGTGTGACCGAGAAACTGGGCATCAAGATTGAGAGGAACCCACCGGAGGAAAAGCTCACTCAGCTCGGTGTTAGGCAATGGCTCACATGGGGTTGTTCTCCAAGCAAATTCCCATGGACTTATGAATCCAAAGAGACTTGCTATCTCCTTGAAGGAAAAGTGAAGGTTACCCCTGATGGAGCTAATGAGTCAGTTGAAATTGCTGCTGGTGACTTGGTTGTGTTTCCAAAAGGGATGAGTTGCACTTGGGATGTTTCAGTTGGTGTGAACAAGCACTATACCTTTGAATAA 297 0.4545 MSSVTEKLGIKIERNPPEEKLTQLGVRQWLTWGCSPSKFPWTYESKETCYLLEGKVKVTPDGANESVEIAAGDLVVFPKGMSCTWDVSVGVNKHYTFE* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00689 98 PANTHER OS04G0445200 PROTEIN 2 98 - -
Rops5g00689 98 SUPERFAMILY RmlC-like cupins 19 95 IPR011051 -
Rops5g00689 98 Gene3D Jelly Rolls 1 97 IPR014710 -
Rops5g00689 98 CDD cupin_TM1112-like 29 97 - -
Rops5g00689 98 Pfam EutQ-like cupin domain 22 95 IPR008579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00689 Rops-Chr5 12215159 12217239 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00689 K06995 - gmx:100527331 188.348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00689 5 12215159 12217239 Rops5g00689 5 12215159 12217239 ECH
Rops5g00689 5 12215159 12217239 Rops6g01579 6 32760493 32762290 PCT