Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01572 ATGGGTTCGACCTCACCCGACCCGTTAACCCCTTCCGACGTGGCGGTGAAGAAACGCTACGAGGGCCTTCTGACGGTGCGGACACGAGCCATGAAGGGCAAAGGTGCTTGGTATTGGGCCCACCTCGAGCCCATTCTGGTTTCCGGCAAGCCCATCTCCGTCAAGCTCAAGTGTTCCCTCTGCCACTCTCTTTTCTCTGCTTCCAACCCTTCACGAACCGCTTCCGAACACCTCAAGAGAGGAACTTGTCCCAGTCTCAACCATTCTCCGTCGCCAATTTCTTTTGTCCCCGTCGCTACCAGGAAGAGAACAACCTCCCCTCATCGGAATCACTCCTTTCAACAACTGGGTTACTCTCACCTTGTTGTTGAAGGGGTCAATGATCATCAAATTCAAAATCAAAATCAGCATTTGTTGTCGTCTGATGGAAAGGAAGATTTGTGTGCTTTGGCTGTCTTTGAAGAGAAACTAAAGAGTCCTAAGAATCCATCACCTGTTGTTGCTTTGACCAATGAACAGGTCAACTCTGCTGTTGAGTTGCTTGCAGATTGGTTCTTTGAGTCATGTGGGTCAGTGCCTCTTTCCACCATTGAACACCCCAAGTTTCAAGCTTTTCTTACCCACTTGGGTTTGCCACCACTAACGTTGAGAAATGAGATATGGGGTTCTAGACTTGAGGAAAGGTTTAGCACGGCCAAGGCTGAGTCAGAAGCTAGAATCAGAGATGCACTGTTTTTCCAAGTGGGGAGTGATGGTTGGAAGAGAAAAGATTGTTTTGGGGGAGGAGGAGATGATGGTTTGGTGAAATTCATGGTGAATCTTCCCAATGGGACTAGTTTGTTTCAAAGGGTGGTGTTTAATGAGGGAGTGGTGTCATCCAAGTATGCAGAGGATATTTTGTGGGAGACTGTGATGGGTGTTAGTGGAGGTGTGGTCCAGAGGTGTGTTGGAATTGTTGCTGACAAGTTTAAGGCAAAGGCATTGAGGAACTTGGAGGTTCAGAATCACTGGATGGTGAATATCTCTTGTCAGCTTCAGGGGTTCATTAGTTTGATCAAGGATTTCAGCAACGGGCTCCCCCTTTTCAGGGTTGTGGCTGAGAATTGTCTCAAGGTTGCAAATTTTATAAATTCTGAATCTCAGGTTAGGAATAGTTTTCTCAGGTACCGGATGCAGGAGAATGGGTATGCTGGGTTGGTTAGAGTTCCCTCACCTAAATGCGATGTGTTGAAGAACTTTGCATCTATGTTTCCAATGCTGGAGGATCTCTTGAGCTGTGCTAGAGTAATCCAAATGGTCATGTTGGAGGTGTCATGCATGGAGGATCCACTAGCCAGAGAAGTTGCTGGAATGGTTCAGAGTGAGGGGTTTTGGAATGAAGTGGAAGCAGTTTACTCACTGGTAAAGCTTATCAGAGGAGTGGTTCAGGACATTGAGGCTGAGAGGCCATTGATTGGTCGATGCCTGCCTCTTTGGGGGGAGCTGAGAACCAAAGTCAAGGAGTGGTGTGCCAAGTACAGTGTTGCGGAAGAACCTGTGGAGAAAATAATTGAAAAACGATTCAGAAAAAACTATCACCCTGCATGGTCAGCTGCATTTATACTTGATCCACTTTACTTGATCAAAGACACAAGTGGAAAGTACCTTCCTCCATTCAAGTGCTTAACTCGTGAGCAAGAGAAAGATGTAGATAAGTTATTGACAAGGCTAGCTTCCAGAGAAGAAGCTCATGTTGTGTTGATGGAGCTCATGAAATGGAGGTCTGAAGGGCTTGATCCACTTTATGCACAGGCTGTTCAGATGAAACAACAAGACCCGGTCACGGGGAAGATGAAAGTTGCAAATCCATTGAGCAGTAGACTTGTTTGGGAAACTTGCCTGCGTGAGTTTAAATCCCTGGGGAAGATTGCCGTGAGGCTTATTTTTCTGCATGCAACCTCATATGGATTCAAGAGTAATTGCTCTTTCATGAGGAAGATTTCTTCACATAAGCATTCGAGAATATCCTTGGAAAGAGCTCAGAAAATGGTATATATTGCAGCTCATGCCAAGCTTGAAAGACGAGACTTTTCAAATGAAGAAGAAAAGGATGCAGAACTGCTTTCCATGGCAAGTAGTGATGATGGCATGCTGGCTGAGGTCTTTGTTGATGCACCCCTAGTGTAA 2166 0.4594 MGSTSPDPLTPSDVAVKKRYEGLLTVRTRAMKGKGAWYWAHLEPILVSGKPISVKLKCSLCHSLFSASNPSRTASEHLKRGTCPSLNHSPSPISFVPVATRKRTTSPHRNHSFQQLGYSHLVVEGVNDHQIQNQNQHLLSSDGKEDLCALAVFEEKLKSPKNPSPVVALTNEQVNSAVELLADWFFESCGSVPLSTIEHPKFQAFLTHLGLPPLTLRNEIWGSRLEERFSTAKAESEARIRDALFFQVGSDGWKRKDCFGGGGDDGLVKFMVNLPNGTSLFQRVVFNEGVVSSKYAEDILWETVMGVSGGVVQRCVGIVADKFKAKALRNLEVQNHWMVNISCQLQGFISLIKDFSNGLPLFRVVAENCLKVANFINSESQVRNSFLRYRMQENGYAGLVRVPSPKCDVLKNFASMFPMLEDLLSCARVIQMVMLEVSCMEDPLAREVAGMVQSEGFWNEVEAVYSLVKLIRGVVQDIEAERPLIGRCLPLWGELRTKVKEWCAKYSVAEEPVEKIIEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQQDPVTGKMKVANPLSSRLVWETCLREFKSLGKIAVRLIFLHATSYGFKSNCSFMRKISSHKHSRISLERAQKMVYIAAHAKLERRDFSNEEEKDAELLSMASSDDGMLAEVFVDAPLV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01572 721 SUPERFAMILY Ribonuclease H-like 314 686 IPR012337 -
Rops6g01572 721 PANTHER OSJNBA0013A04.12 PROTEIN 16 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01572 Rops-Chr6 32700412 32702577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01572 - - gmx:100790244 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00697 5 12324194 12327151 Rops6g01572 6 32700412 32702577 ECH
Rops6g01572 6 32700412 32702577 Rops6g01572 6 32700412 32702577 ECH
Rops5g00697 5 12324194 12327151 Rops6g01572 6 32700412 32702577 PCT