Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00697 ATGCCCCAAAACGAATCCCACTGCCACCACAATGGTGAAACCACCCTCACCACAAGCTCAACCCCTTCATCATCACACTGCACCACCCCCGTTTTGACCCTTCACCTAAGGGAACCTCAAGACCCAATTTTGGTGACAAATTCAGACACCCTTTTGGCCACAACAATGGCTTCCACAAACTCCACCTCCACTGACCCTCTCCCTTCTTCTTCCTCCGAAGACATAGCCATCAAAGCCGTTAACAAACGCTATGAGGGTCTCATCACTGTTAGAACCAAAGCTATCAAAGGCAAAGGTGCTTGGTATTGGGCACATCTTGAACCCATTTTGGTTCGAAATCCAGATACAGGGTTGCCTAAATCAGTGAAACTCAAGTGTTCACTCTGTGACTCTGTTTTCTCTGCTTCAAACCCTTCTAGAACAGCTTCAGAGCATTTAAAGAGAGGAACTTGTTCTAATTTCAGTTCAGGGTTGAAACCCGGTTCAGTTCCTTCCCCGGTTCCCATTTCCTCCATTTCCGTTTCGAACCGGAAAAGGGGATCACCTCAAATGGATCTTAGTTCACCAGTTCCTTATCAAAACCATGCCTTGGCATTGGTTGAAATGGGGTACTCTCAGGTGCATGGTAATACCATGAACCAGCACCATCAGCAACAGAATCAGCATAATCATTTGGTGCTTTCTGGTGGGAAGGAAGATTTGTGTGCTTTGGCTATGTTTGAGGATAGTGTGAAGAAGCTGAAAAGTCCAAAGACTTCACCTGGTCCAGCTTTGAGCAAGGAACAGGTTAATTCTGCACTTGAATTGCTTGCTGATTGGTTCTATGAGTGTTGTGGTTCTGTGTCTTTGTCAACTATTGAGCATAGAAAGTTTCAAGCTTTTCTTAGCCAGGTTGGTTTGCCAACAACAAATTTGAGGCGTGAGATTTCAGGTCCAAGGCTTGATGCTAGGTTCAGTGAGGCAAAAGCTGAGTCTGAAGCTAAGATAAGGGATGCAATGTTTTTTCAGGTGGCTAGTGATGGTTGGAAGAATAGGAATAATTGGTATAGTTTGTGTTGTGGTGGTGAGAGTTTGGTTAAGTTTATGGTGAATCTTCCCAATGGGACTAGTGTGTTCCATAAGGCAGTGTTCAATGGGGGAGTGGTGTCATCAAAGTATGCAGAGGAGGTTTTGTGGGAAACTGTGACTGGTGTTAGTGGGAGTGTGGTGCAAAGGTGTGTGGGGATTGTTGCAGACAAGTTTAAGGCCAAAGCATTGAGGAACTTGGAGATTCAGAATCATTGGATGGTAAATACTTCTTGTCAGCTTCAGGGGTTCCTTAGTTTAATCAAGGATTTTAACAAAGAGCTACCACTTTTCAGGGTTGTGACTGAGAATTGCCTAAAGGTTGCAAATTTTATAGACAATGAATCTCAGGTGAGGAATACTTTTCTCAAGTACAGGATGCAGGAGATGGAATATGCTGGCTTGCTTCGAGTCCCTTCACCAAAATGTGATCCTTTGAAGAATTTTGCATCTGTGTTTCCAATGCTGGAGGACATTTTAAGCTGTGCTAGAGTAATCCAAATGGTTATGTTGGAGGACACGTTTAAGGTAATGTGCATGGAGGATCCATTGGCAAGAGAAGTTGCTGGAATGGTTCAGAATGAGGTATTTTGGAATGAACTAGAAGCTGTTTATTCACTTGTGAAGCTTATCAAAGGAATGGTTCAGGACATTGAGGCTGAGAGACCATTGATTGGTCGATGTTTGCCTCTTTGGGAAGAGCTGAGAACCAAAGTGAAGGAGTGGTGTGCTAAGTACAATGTTGTGGAAGGACCTGTGGAGAAAATAGTTGAAAAAAGGTTCAGGAAAAATTATCACCCTGCATGGTCAGCAGCATATATACTTGATCCACTTTACTTGATTAAAGACACAAGTGGAAAGTACCTTCCTCCATTCAAGTGTTTAACACGTGAACAAGAGAAAGATGTAGATAAGTTACTCACAAGGCTAGCTTCCAGAGAAGAAGCTCATGTTGTGTTGATGGAGCTCATGAAATGGAGGTCAGAAGGGCTTGATCCACTTTATGCACAAGCTGTTCAGATGAAACAAAGGGATCCAGTGACTGGGAAGATGAAAGTTGCAAATCCACTGAGTAGTAGACTTGTGTGGGAAACATGCTTGTGTGAGTTTAAATCACTAGGGAAGATTGCGGTGAGGCTCATTTTTCTGCATGCAACCTCATGTGGATTTAAGAGTAATTGGTCTTTCATGAGGAAAATTTCAGCAAATAAACAATCAAGAATTGCCTTGGAAAGAGCTCAGAAAATTATTTATATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCTAGTGAGGAAGAAAAGGATGCAGAATTGTTTTCCATGTCTGGTAGTGAGGATGGCATGCTGGCTGAGGTCTATGCTGATGCAACCTTAGTGTAA 2451 0.43 MPQNESHCHHNGETTLTTSSTPSSSHCTTPVLTLHLREPQDPILVTNSDTLLATTMASTNSTSTDPLPSSSSEDIAIKAVNKRYEGLITVRTKAIKGKGAWYWAHLEPILVRNPDTGLPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCSNFSSGLKPGSVPSPVPISSISVSNRKRGSPQMDLSSPVPYQNHALALVEMGYSQVHGNTMNQHHQQQNQHNHLVLSGGKEDLCALAMFEDSVKKLKSPKTSPGPALSKEQVNSALELLADWFYECCGSVSLSTIEHRKFQAFLSQVGLPTTNLRREISGPRLDARFSEAKAESEAKIRDAMFFQVASDGWKNRNNWYSLCCGGESLVKFMVNLPNGTSVFHKAVFNGGVVSSKYAEEVLWETVTGVSGSVVQRCVGIVADKFKAKALRNLEIQNHWMVNTSCQLQGFLSLIKDFNKELPLFRVVTENCLKVANFIDNESQVRNTFLKYRMQEMEYAGLLRVPSPKCDPLKNFASVFPMLEDILSCARVIQMVMLEDTFKVMCMEDPLAREVAGMVQNEVFWNELEAVYSLVKLIKGMVQDIEAERPLIGRCLPLWEELRTKVKEWCAKYNVVEGPVEKIVEKRFRKNYHPAWSAAYILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLCEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKISANKQSRIALERAQKIIYIAAHAKLERRDFSSEEEKDAELFSMSGSEDGMLAEVYADATLV* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00697 816 SUPERFAMILY Ribonuclease H-like 404 781 IPR012337 -
Rops5g00697 816 MobiDBLite consensus disorder prediction 1 28 - -
Rops5g00697 816 PANTHER OSJNBA0013A04.12 PROTEIN 80 782 - -
Rops5g00697 816 MobiDBLite consensus disorder prediction 155 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00697 Rops-Chr5 12324194 12327151 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00697 - - psat:127131004 1303.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00697 5 12324194 12327151 Rops6g01572 6 32700412 32702577 ECH
Rops5g00697 5 12324194 12327151 Rops5g00697 5 12324194 12327151 ECH
Rops5g00697 5 12324194 12327151 Rops6g01572 6 32700412 32702577 PCT