Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01568 ATGTCTAAACCTCAAAATGATCCCCTTACGCAAGCTGAAACAACATGTGGAACACTCCTGTATGAACTTCAGATAATATGGGATGAAGTTGGGGAATCTGAGGTTGACAGAGATAGAATTCTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTGTACAGAAGGAAGGTAGATCAGGCAAATCGGTCTAGAGCTCAATTAAGACAGGCAATTGCAGATTGTGAGGCCGAACTTGCAGCCATCTGTTCAGCAATGGGAGAGCGACCGGTACATATTAGGCAGTCCGATCAAAATGCTGGAAGCCTGAAAGAAGAGCACACAAGAATTCTTCCACAGTTGGAGGAAATGCAAAAAAGGAAGTCTGAGCGTAGAAATCAATTTATAGAGGTTCAAGAGCAGATTCAAAATATCTCAATGGAGATTTATGGTCCCAGAGAGTATATTCCTGCAATTATAGATGAAAGTGATTTATCCTTGAGAAAACTTGAAGAATTGCACAAACAGCTGCATGCACTTCAAATTGAGAAGAGTTGTCGCCTAAAGAAGGTCCAGGAGCAGCTGTACACTTTAAATTCTCTTTGTTTAGTGCTTGGTTTGGACTTTAAGCTGACAGTCAATGGAATTCATCCCAGTTTGGGAGACTTAGAAGGATCTAAGTGTGTAAGTAATGATACCATCCAGCAATTGGCTGTTGCTATACAAGAACTGCGGGAAGTTAAATTACAGAGAATGCAGAAGCTCCAAGATCTTGCATCAACTATGTTGGAGCTCTGGAACTTGATGGATACACCTATTGAAGAGCAACAAATGTTTCAGAATGTTACTTGTAATATAGCTGCTTCAGAACATGAAATAACAGAACCAAACACCCTGTCCGTGGACTTCATCAATTGCGTTGAGGCGGAAGTTTCCAGGTTAGAAGAGTTTAAATTGAGTAAAATGAAAGAGCTTGTATTTAAGAAGAGAACAGAGCTGGAGGAGATTTGTCGAAAGACTCATTTGGTTCCAGAAGTAGGTGGTGCAATTGAATATGTTGTTGAAGCTGTAGAATCTGGATCTGTGGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGATTGCCCAAGTCAAAGAGGAAGCTTTTAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGGCAGCGTGTGATGAAGAGTCTTGGCTTGAGGAATACAACAGGGATGAAAATCGATACAATGCTGGCAGAGGTGCTCATCTTACTCTCAAGCGAGCTGAGAAAGCCCGTGCCTTGGTTAACAAAATTCCAGCAATGGTTGATGGTTTGACTTCAAAAACTATAGCATGGGAAAAGGAAAAAGGCATTGAGTTCACATATGATGGTATTCGTCTACTCTCCATGCTTGAAGAGTACACTATATTACAGCAAGAGAAAGAGCAAGAACGACGTAGACAGCGGGATCTGAAGAAACTTCAGGGACAAATGATAGCGGAACAGGAGGCACTATATGGGTCAAAACCAAGCCCTTCAAAGCCCCAGAGTGTAAAAAAGGGACCTAGAATGTCAACGGGAGGTGCAGCTAGTAGAAGAGTCTCCCTTGGGGGAGCAATGCTTCAAACTCCAAAACCTGATTCAAAAGCTACTAATTCACGTGCCGTGAGAAAGACTGACAAAGTGAACCAAATTGAGCAACAAAATTACCTGGATGATGGCATTTCGTGTTTATCATCAGCTAGAAGAGGGCTAGATATTGCAGGCGGTCCTGTGAAAAAGCACTCATTTGGTGCTGGGAGTGGTTTAGAATCTCCTCTGACGAGACAACCTTTTTCTCCCATTTCTTCTAATGTATCATCAAAAGTGAACATGCCAAATACCACAAATGATCTGAATAATCAGAGTGAGAAGTTGCAGAAAACAATGCCACTTAACAATGTGCCATTCACTACTCCCTCCAAGACAGCTGCTACTGTGGTAGATGAAGGGAATAGAACTCCAAAGGCAATGCCTATTCCTGTCCCTGCTACACCTTCGACAGTATCAGTTCCAATGAATATGGCCATGACTCCAGTTCCTTCATCAGTTTTGAAGAATGTGAGCATGACTACTCCAGCTCCTTTTGGAGGTGACTTGGTTCAAGAGATTGAATATTCCTTCGAGGAAAGAAGGCTTGGTTTTGTGTTAGGATGA 2169 0.4191 MSKPQNDPLTQAETTCGTLLYELQIIWDEVGESEVDRDRILFELEQECLEVYRRKVDQANRSRAQLRQAIADCEAELAAICSAMGERPVHIRQSDQNAGSLKEEHTRILPQLEEMQKRKSERRNQFIEVQEQIQNISMEIYGPREYIPAIIDESDLSLRKLEELHKQLHALQIEKSCRLKKVQEQLYTLNSLCLVLGLDFKLTVNGIHPSLGDLEGSKCVSNDTIQQLAVAIQELREVKLQRMQKLQDLASTMLELWNLMDTPIEEQQMFQNVTCNIAASEHEITEPNTLSVDFINCVEAEVSRLEEFKLSKMKELVFKKRTELEEICRKTHLVPEVGGAIEYVVEAVESGSVDPACVLEQIELQIAQVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDENRYNAGRGAHLTLKRAEKARALVNKIPAMVDGLTSKTIAWEKEKGIEFTYDGIRLLSMLEEYTILQQEKEQERRRQRDLKKLQGQMIAEQEALYGSKPSPSKPQSVKKGPRMSTGGAASRRVSLGGAMLQTPKPDSKATNSRAVRKTDKVNQIEQQNYLDDGISCLSSARRGLDIAGGPVKKHSFGAGSGLESPLTRQPFSPISSNVSSKVNMPNTTNDLNNQSEKLQKTMPLNNVPFTTPSKTAATVVDEGNRTPKAMPIPVPATPSTVSVPMNMAMTPVPSSVLKNVSMTTPAPFGGDLVQEIEYSFEERRLGFVLG* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01568 722 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 561 IPR007145 GO:0000226|GO:0008017
Rops6g01568 722 FunFam 65-kDa microtubule-associated protein 6 366 499 - -
Rops6g01568 722 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Rops6g01568 722 MobiDBLite consensus disorder prediction 493 523 - -
Rops6g01568 722 Coils Coil 112 132 - -
Rops6g01568 722 Coils Coil 49 76 - -
Rops6g01568 722 MobiDBLite consensus disorder prediction 529 548 - -
Rops6g01568 722 Coils Coil 458 488 - -
Rops6g01568 722 Gene3D - 365 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01568 Rops-Chr6 32668273 32673372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01568 10 543 EF-hand Containing Proteins AT5G62250 57.169 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01568 K16732 - gmx:100777734 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00704 5 12401002 12407086 Rops6g01568 6 32668273 32673372 ECH
Rops6g01568 6 32668273 32673372 Rops6g01568 6 32668273 32673372 ECH
Rops5g00704 5 12401002 12407086 Rops6g01568 6 32668273 32673372 PCT