Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00704 ATGTCTAAACCTCAAAATGATCCTCTTCCGCAAGCTGAAAAAACTTGTGGATCACTTCTTCATGAACTTCAGATAATATGGGATGAAGTTGGGGAGTCTGAGGCTGAAAAAGATAGAATGTTGTTTGAGCTCGAACAAGAATGTCTAGATGTATACAGAAGAAAGGTAGACAAAGCTAATCGGTCTAGAGCTCAGCTAAGGCAGGAAATAGCTGATTCTGAGGTAGAGCTTGCAGCTATCTGTTCAGCAATGGGAGAGCGACCAGTACATATTAGGAAGTCTGATCAAAAGGCCAGATGCTTGAAGGAAGAGCTAGCAAGAATTCACTCAGAGCTGGAGGAAATGCGAAAAAGGAAGTCTGAACGCAGAAATCAATTTATAGAAGTTCAAGAGCTGATTCAAAGTACATCAAATGAGATATATGGTCCAATAGAATATATTCCAGCCATTGTAGATGAAACTGATTTATCATTGAGAAAGCTAGAAGAATTGCACAGACAGCTTCATGCACTTCAAAAGGAGAAGAGTGATCGCCTCAAGAAGGTCCAAGACCACCTGTACACTATAAATTCTCTTTGTTTAGTGCTTGGTTTGGAATTTAAGCAGACAGTCAGTAGATTCCATCCTAGTTTAGGAAATTCAGAAGGATCTAAGAGTGTAAATAATGATACCATCAGGAAATTGGCAGGTGCTATACAAGAACTACGGGAAGCTAAATTACAGCGAATGCAGAAGCTCCAAGATCTAGCAACAACAATGTTGGAGCTCTGGAATTTGATGGATACACCTTTTGAAGAGCAACAGATGTTTCAGAATGTTACTTGCAATATAGCTGCATCAGAACATGAAGTAACTGAACCGAACACCTTGTCCGAGGACTTCATCAATCATGTTGAGGCAGAAGTATCTAGGTTAGAAGGGTTAAAATCAAGCAAAATGAAAGAACTTGTTTTGAAGAAAAGAGCAGAGCTAGAGGAGATTTGTCAAAAGTCACATTTGGTTCCAGAAATTGATAGTGCAGTGGACTATGCTGAAGCTATAGAGTCTGGAACTGTAGACCCTGCTTGTGTGCTTGAACAAATTGAGCTTCAGATTGCCCAAGTCAAAGAGCAAGCTTTTAGCAGAAAAGAAATACTTGAAAAGGTTGAGAAATGGTTGTCAGCATGTGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGAAAATCGATACAATGCTGGAAGAGGTACTCATCTTAATCTCAAGCGAGCTGAGAAAGCCCGTGCCTTGGTTAACAAAATTCCAGCAATGGTAGACGGGTTGACTTCAAAAACTATAGCATGGGAAAATGATATAGGCATTGAGTTCACATACGATGGGACCCGTCTGCTCTCTATGCTTGAGGACTACACCCTATTACGACAAGAGAAGGAGCAAGAACGCCGTAGACAGCGGGACATGAAGAAACTAAAGGGACAATTGATAGCGGAACAGGAAGCACTATATGGGTCAAAACCAAGCCCTATAAAGTCCCAGAGTGGTGTAAAAAAGGCACCTGGGACGCCAACTGGAAGTGCAGCTAGAAGAATCACTGTTGGAGGAGCAATGCCGCAAACTCCAAAACAATCATGCTCCACAAGGAAGACTGACAAAGTGCACAAAATTGAGCAAGATGACAATGTTTCATGTTTATCATCAGCTAGGAGAGGACTTGACATTGCTGGTGTTCCTATAAAAAAATACTCATTTGGTGCTGAAAGTGTTCGGGATATAGAATCTCCTTTGACAAGACAACCTTTTTCTCCCATCTCTTCCAAAGTATCATCAAAAGCTAATGTGGCAAATGCCACAGATGAACTGAATGAGAAGTTGCTGAAAACATTAGCACTTAACAATTCACCATTCACTACTCCGTCAAAGACAGCCACAGTGGTAGATGAAGAGAATAGAAATCCAAAGGCAATGCCTATTCCTGTCCCCACTACACCTTTGACAGTGTCAATTCCTATGAACATGACCATGACTCCTGCTCCTTCATCAGTTCCTTTTAGAGGTGACTTGGTTCAAGAGATTATTGAATATTCCTTTGAGGAAAGAAGGCTCGGTTTTGTGTTAGCATGA 2103 0.4113 MSKPQNDPLPQAEKTCGSLLHELQIIWDEVGESEAEKDRMLFELEQECLDVYRRKVDKANRSRAQLRQEIADSEVELAAICSAMGERPVHIRKSDQKARCLKEELARIHSELEEMRKRKSERRNQFIEVQELIQSTSNEIYGPIEYIPAIVDETDLSLRKLEELHRQLHALQKEKSDRLKKVQDHLYTINSLCLVLGLEFKQTVSRFHPSLGNSEGSKSVNNDTIRKLAGAIQELREAKLQRMQKLQDLATTMLELWNLMDTPFEEQQMFQNVTCNIAASEHEVTEPNTLSEDFINHVEAEVSRLEGLKSSKMKELVLKKRAELEEICQKSHLVPEIDSAVDYAEAIESGTVDPACVLEQIELQIAQVKEQAFSRKEILEKVEKWLSACDEESWLEEYNRDENRYNAGRGTHLNLKRAEKARALVNKIPAMVDGLTSKTIAWENDIGIEFTYDGTRLLSMLEDYTLLRQEKEQERRRQRDMKKLKGQLIAEQEALYGSKPSPIKSQSGVKKAPGTPTGSAARRITVGGAMPQTPKQSCSTRKTDKVHKIEQDDNVSCLSSARRGLDIAGVPIKKYSFGAESVRDIESPLTRQPFSPISSKVSSKANVANATDELNEKLLKTLALNNSPFTTPSKTATVVDEENRNPKAMPIPVPTTPLTVSIPMNMTMTPAPSSVPFRGDLVQEIIEYSFEERRLGFVLA* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00704 700 Coils Coil 461 487 - -
Rops5g00704 700 FunFam 65-kDa microtubule-associated protein 6 365 498 - -
Rops5g00704 700 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 506 - -
Rops5g00704 700 Coils Coil 154 181 - -
Rops5g00704 700 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 549 IPR007145 GO:0000226|GO:0008017
Rops5g00704 700 MobiDBLite consensus disorder prediction 499 513 - -
Rops5g00704 700 Coils Coil 49 76 - -
Rops5g00704 700 Coils Coil 91 125 - -
Rops5g00704 700 MobiDBLite consensus disorder prediction 499 546 - -
Rops5g00704 700 Gene3D - 364 498 - -
Rops5g00704 700 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00704 Rops-Chr5 12401002 12407086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00704 11 533 EF-hand Containing Proteins AT5G62250 55.618 1.81e-178 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00704 K16732 - gmx:100777734 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00704 5 12401002 12407086 Rops6g01568 6 32668273 32673372 ECH
Rops5g00704 5 12401002 12407086 Rops5g00704 5 12401002 12407086 ECH
Rops5g00704 5 12401002 12407086 Rops6g01568 6 32668273 32673372 PCT