Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01566 ATGGCACTCGAAACGCTCCTCGTAAAGGTCAAAACCGCCATATCAAACAGCTTTGACTCTGTTCCACCGAAGCTTCTAAAAAAGAAACCTTCCTTCAAGTCCAAACGGAACGTCGGCGTATTGACCTTCGAGATCGCTGGCGTCATGTCGAAGCTCCTCCACCTATGGCAGTCCCTCTCCGACGCCACCATCATACGAATCCGAAACGACGCCGTAACTCTCGAGGGCGTTCGGAAAATCATCTCCAACGACGAGTCCTTCCTCTTAGGACTCGCTTGCGCCGAGTTCGCTGAGAGTCTCCGACTCGCCGCCAACTCGGTCGCCGGACTCAGTCACCGGTGCGAGGACCCCAACCTCAGGAACTTCCACCGGGCTTTCCTCGAATTCGCAGACTCGGGCCGTGACCCACATGGGTGGGCCCTCTCGGGCCCGAAGGAAACCGAAGCCAAGCTCAAGAAAATGGAACGTTACGTGACTCACACGGCAACTTTTCATCGTGAAATGGAGGAACTTTCTATTTTGGAAAGTGGGTTTAGGAAGGTTTTGAGTGAAGGCAATGAAGGTGGTGGTTCTTTGGTTGGGAAAGAGCAGAAAGTTTATGAACTTCAGCAGAAGATTTTTTGGCAGAAACAAGAGGTTAAGGATCTTAAAGATAGGTCCTTGTGGAGTAAAAGTTTTGATAGTGTTGTTATTTTGCTTGTGAGGTTTAGTTTCACTGTTTTAGCAAGGATCAAGGTTGTGTTTGGGATTGGTCATTGTGTGCCTTGTTTGTCTCCTAGTTTGTCAACTTCTGCCACTGTTTATCCCTCTGATCAAAATCCAACCACTCCTTGTCATGAATTCGTTTCTGGGTCATTGGAAATTTCAAAACTTGAAGGGAAGAAGGAAGGTTTGGGAAGTGGGTTTTTTGAGTCTAATTCTGAGCTTTTGAAGCCACCACCTAGTACTTTGGGTGCTGCGGCTTTGGCTTTGCACTATGCCAACTTGATCATAGTGTTGGAGAAGATGATAAAGTCACCCCATTTGGTTGGTGTGGATGCTAGGGATGATTTGTATGGTATGTTACCAAGTAGCATAAGGTCAGGTTTGAGGGCTAGGTTGAAAGGAGTGGGGTTTTGTGCGAGCGATCCTGTTCTTGCTGGTGAATGGAGGGATGCTTTGGGGAGGATATTGGGGTGGTTGTCACCTTTGGCACATAACATGATCAAGTGGCAAAGTGAAAGGAGCTTTGAGCAGCAAAACTTGGTGCCCAAGACCAATGTGTTGCTATTGCAGACTTTGTTCTTTGCAAACAAGGAGAAGACCGAAGCTGCCATAACTGAGTTGCTTGTGGGGTTAAACTATATTTGGAGGTTTGAAAGGGAAATGACTGCTAAGGCACTGTTTGAATGTGCCAATTTCAATGGGTTGTCAAAATTGCAAAATCCAAGTTAA 1434 0.4693 MALETLLVKVKTAISNSFDSVPPKLLKKKPSFKSKRNVGVLTFEIAGVMSKLLHLWQSLSDATIIRIRNDAVTLEGVRKIISNDESFLLGLACAEFAESLRLAANSVAGLSHRCEDPNLRNFHRAFLEFADSGRDPHGWALSGPKETEAKLKKMERYVTHTATFHREMEELSILESGFRKVLSEGNEGGGSLVGKEQKVYELQQKIFWQKQEVKDLKDRSLWSKSFDSVVILLVRFSFTVLARIKVVFGIGHCVPCLSPSLSTSATVYPSDQNPTTPCHEFVSGSLEISKLEGKKEGLGSGFFESNSELLKPPPSTLGAAALALHYANLIIVLEKMIKSPHLVGVDARDDLYGMLPSSIRSGLRARLKGVGFCASDPVLAGEWRDALGRILGWLSPLAHNMIKWQSERSFEQQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYIWRFEREMTAKALFECANFNGLSKLQNPS* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01566 477 Pfam Domain of unknown function (DUF3475) 40 95 IPR021864 GO:0045927
Rops6g01566 477 PANTHER BNAC09G50660D PROTEIN 32 465 - -
Rops6g01566 477 Pfam Protein of unknown function (DUF668) 316 403 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01566 Rops-Chr6 32642200 32644105 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01566 - - gmx:100787581 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01566 6 32642200 32644105 Rops6g01566 6 32642200 32644105 ECH
Rops5g00709 5 12508723 12510533 Rops6g01566 6 32642200 32644105 PCT