Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00709 ATGGCCCTCGAAACGTGGCTCATCAAGGTGAAAACCGCGTTTTCCAAAAGCTTCGACACTGTGCTTCCCCCGAAGAAAACGACGTCGTCGTCGAAGCCAAAACTCGTCGCCGTTTTGGCCTTCGAGGTCGCCGGAGTGATGTCGAAGCTCCTCCACCTCTGGCAATCCCTCTCCGACGCCAACGTCGTTCGACTCCGAAACGACGCCGTTTCAGTCGAGGGCGTTTGGAAGCTCATCTCAAACGACGAGTCGTTCCTGATCAAACTCGCCGCAGCCGAGTTCGCCGCCTCGCTCCGACTCGTCGCTGACTCGGTCTCCCGACTCAGCCACAAATGCCACAACCCCACCCTCCGTTCCTTCCACCGAGTCTTCACTGAGTTCGCTGACTCGGGCCTTGACCCGCACTCGTGGACCCTCACAAATCCCAAAGAAATCGAAGCCAAACACAAGAGAATGGAACGTTACGTGAACCTCACGGCAACGCTTCACAAAGAGATGGACGAGCTTTCACTTTTGGAAAGTGCGTTGAGAAAAGCACTTCACAACAATAACAACAACGACACAGAACCTTGTTCTTTTCTTAAGGATCACCACAAAGTTAGTGACCTTCAGAACAAGATTTTCTGGCGGAAACAAGAGGTTAAGAATCTCAAAGAAAAATCTTTATGGAACAAAAACTTTGATGGGGTTGGTTTGTTGCTTGCAAGGTTCATTTTCACTGTGTTAGCAAGGATTAAGGTTGTCTTTGGAATTGGACACCGTGTACCTTATTTATCTCGAAGTTTATCAGCTTCTGCCACTGTTTATCCCTCAGATCATCAAAACCCTACTCCTGATTGTGTTTTTGTCTCTGGGCCGTTGGAAAGTTTGAAACTTGATCAGAAGAATGAGGATTTGGGAAGTGGGTTTTTTGAGTCTAATTGCAAGGTGTTGAAGCCACCACCAGGTAGTTTAGGTGCTTCAGCTTTGGCTTTGCATTATGCTAATTTGATTATTGTGATGGAGAAGATGATAAAGTCACCACAGTTAGTTGGTTTAGATGCAAGGGATGATTTGTATGCTATGTTACCAAGTAGCATAAGGTCATCTTTAAGGTCAAGGTTGAAAGGTGTTGGGTTTTCTGCTTGTGATCCTGTGCTGGCTAGAGAATGGAGAGATGCATTGGGGAGGATACTTGGGTGGCTTTCACCTTTGGCACATAATATGATCAAGTGGCAAAGTGAAAGGAGCTTTGAGCAGCAAAGTTTGGTTCCAAAGACTAATGTGTTGTTGTGGCAAACTTTGTTCTTTGCAAATAAGGAGAAGACAGAAGCTGCTATAACTGAACTGCTTGTGGGGTTGAACTATGTTTGGAGATTTGAAAGGGAAATGACTGCTAAGGCATTGTTTGAATGCACCAATTTCAATGGGTTGCTTAAGCTTTCAAAAACCTAG 1434 0.4596 MALETWLIKVKTAFSKSFDTVLPPKKTTSSSKPKLVAVLAFEVAGVMSKLLHLWQSLSDANVVRLRNDAVSVEGVWKLISNDESFLIKLAAAEFAASLRLVADSVSRLSHKCHNPTLRSFHRVFTEFADSGLDPHSWTLTNPKEIEAKHKRMERYVNLTATLHKEMDELSLLESALRKALHNNNNNDTEPCSFLKDHHKVSDLQNKIFWRKQEVKNLKEKSLWNKNFDGVGLLLARFIFTVLARIKVVFGIGHRVPYLSRSLSASATVYPSDHQNPTPDCVFVSGPLESLKLDQKNEDLGSGFFESNCKVLKPPPGSLGASALALHYANLIIVMEKMIKSPQLVGLDARDDLYAMLPSSIRSSLRSRLKGVGFSACDPVLAREWRDALGRILGWLSPLAHNMIKWQSERSFEQQSLVPKTNVLLWQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTNFNGLLKLSKT* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00709 477 Pfam Domain of unknown function (DUF3475) 38 93 IPR021864 GO:0045927
Rops5g00709 477 Pfam Protein of unknown function (DUF668) 318 404 IPR007700 GO:0045927
Rops5g00709 477 PANTHER BNAC09G50660D PROTEIN 25 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00709 Rops-Chr5 12508723 12510533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00709 - - gmx:100801628 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00709 5 12508723 12510533 Rops5g00709 5 12508723 12510533 ECH
Rops5g00709 5 12508723 12510533 Rops6g01566 6 32642200 32644105 PCT