Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01250 ATGTTTATCAGGCCAAGGGATGCTGGTGCTTTTAGTATATTCAAATGGAAACGTCAAGGTGAATCATCAGTGACAGCTGGTTTACTTCAGGATGTTCCCCCAGAGATTGAATTGTCTGATTATAGAAGGATCCCAAGTCCAGGTAGTGAGAGCCCTTCAGGGCTTCTTAACGGTGAGAGCCTAAATGTAGAGCCAATTGCTGATTTGGATCTCTTCTTCGAAAGGCTTTACAGCTACTACTGTGAGAAAGGGCTCTGGTGCATTATCATAAAGTGGCTTGTTGAACTTCTGAGTCTAGGGTTCACCATATGTTTTTCAGGATTCTTTTTACTATATGTTGATTGGAATGGACTCCGTAATGCAAAGTGTGGGATGGATGCAGTTGAATCTGGAAGGAAGCCCTGTGATCTTGCTAAAGAAGCTCTTCATGAACACCCTTTAACCCCATTAACACTTAGCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCTATCTATTGGATATTTTGCTTCTTGAGATTCTTTGCTCAACTAAAGGATACTCTGGAAATCCGACAGTTTTACTACAATAGTCTCCATGTTACTGATAATGAAATTCAAACCATGCCCTGGGCTACAATTCTTGAAAAGGTTGTTATTGTGCAAAGCTCACAACAACTCTGTGTGGTAAAGGATCTTACTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAAGGTGTGCTTGCTTTTCCCATTTCTCAGTGGTTCCCAGGTGCTGGTCCTACAGTGAAATCTGGTGTTAATGGAACACAATATCGTCTGATACTAACCAAGACTCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGCAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAGGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGCATATCTCTTTCTAAGGCATGCTGAACAATTTTATAATCACCCGAGCACAGCATCATCTCAAAGATGGTCAAATTTGTCAAGATGGATTTTTAGGGAATTCAATGAGGTGGACCATCTCTTCAGGCATCGGATTAACAGCAGTGTATTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCATTGCAAAATTCATCTCATTCGTATCTGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTAGAGGAGTCTCTACTAGAGGGTCATATATTTGGTCGAAACTTATTGTGGTATGCTGCTGTTTTTGGGACTATAACTGCCATTAGCCGGGCTGCAATTGCAAATGAACTTCTGGTCTTAGACCCAGAAGGAGCAATGTCTATGGTAGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAAATGGTTCGAATTGAGTTTGAAACCTTATTCCAGTATACTGGGATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTTACTCCATACTTGCTTCTGTTTGTTGTCCCAAAGCGGGTTGATGATATCTTGCAGTTCATTTCAGATTTTACTGTGGATGTTGAAGGTGTTGGTCATGTATGCAGTTTTAGTGTCTTTGATTTTCAAAAGCATGGAAACAGTAGTTATGGTTCCCCATACAATGCACCTCGTAGCCAGAGGAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTGAGCTTTCAGAGTAGTTACCCTTCATGGGAACCGAATGCGGAGGGGAAGCAGTTTTTGCTAAATCTGAGAACGTTCAGAGAGCAAAAGTTATCAGGACATGTAAACAGACAAGGATTTTCCCCTCTCCGAATGTGGAGAGGCAGTCCCAACATGGGAAGCAATGGAGACAGAAACAGGTTTGCATCCAGGGAAATGCCATACAGTACTTTTGCAACTGGCAATCACTTGGATTCATTGTGGTTAATTGAAGCCAACAATCAAAACAATCATCCGTATCTTCTTGATTGGTACTATACTTCGCAATCCCATGATGTGACTTCAAGAGATGTTCCAACAGATCCATTTGATGAAGTAACTCATCATCATTCCAGAGATTGGATGCCCTCCAACTTGGCACAGAATGAACCTGAGTATGAAGAAGAACACATAAATGAGTATTGTGATGATCGTGCTGCTTCTCATCTCGGGGCTTCCACTTCAGCTCCCATCTTCAGGGAAAGCTTAATTCAAGATCAAAATATCAATGATCTGCTCCACACTACCAGGAGTCATTGGTGGGCTAGAAGTCATCCACAGGGTGGACATGGTCAGACAAGCTTTTTTGAACCTCCAGACTTCAATCATGAAAAAGCGTACAATTACTATGATAAAATTTCTGATAGAGGGTCAGAGGATCAAGATCAGGAACAGTACTGGAGAGATTATCACAAACCATCTAGTACAGCACATAGAGATGATTTAGAGGCAGGAGAATTCAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAATTCCCACTGTAAATCCAAACACTGCTAGCTTTTGA 2595 0.4096 MFIRPRDAGAFSIFKWKRQGESSVTAGLLQDVPPEIELSDYRRIPSPGSESPSGLLNGESLNVEPIADLDLFFERLYSYYCEKGLWCIIIKWLVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGRKPCDLAKEALHEHPLTPLTLSKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRQFYYNSLHVTDNEIQTMPWATILEKVVIVQSSQQLCVVKDLTAHDMVMRLMRKENYLIGMLNKGVLAFPISQWFPGAGPTVKSGVNGTQYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPRTLKKRLMVVGLAMLLLSPFLVIFMLAYLFLRHAEQFYNHPSTASSQRWSNLSRWIFREFNEVDHLFRHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAIANELLVLDPEGAMSMVVQHTHYMPKRWRGKESTEMVRIEFETLFQYTGMMLLEEMASIFLTPYLLLFVVPKRVDDILQFISDFTVDVEGVGHVCSFSVFDFQKHGNSSYGSPYNAPRSQRSSQGKLEKSFLSFQSSYPSWEPNAEGKQFLLNLRTFREQKLSGHVNRQGFSPLRMWRGSPNMGSNGDRNRFASREMPYSTFATGNHLDSLWLIEANNQNNHPYLLDWYYTSQSHDVTSRDVPTDPFDEVTHHHSRDWMPSNLAQNEPEYEEEHINEYCDDRAASHLGASTSAPIFRESLIQDQNINDLLHTTRSHWWARSHPQGGHGQTSFFEPPDFNHEKAYNYYDKISDRGSEDQDQEQYWRDYHKPSSTAHRDDLEAGEFNLHFDDIYSRPPEIPTVNPNTASF* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01250 864 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Rops6g01250 864 PANTHER APG9 AUTOPHAGY 9 6 809 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01250 Rops-Chr6 27614964 27621380 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01250 K17907 - gmx:100779344 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01250 6 27614964 27621380 Rops6g01250 6 27614964 27621380 ECH
Rops8g03088 8 68633482 68642271 Rops6g01250 6 27614964 27621380 PCT