Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01165 ATGCTCACCACTCTTCCCAACGCTGCTTCTGCTTCTTCTGCAAGCTTCATATTCAACGTTCAAGCTCACCCACTTCTCCAATTCTACAATTTTCAGTCAAGGAAGCATAAATGCAGAAATTTAAGGGTCAATATGTGCTCTCATCATTCCCTTCCTCAAAACCCCATCGTTGTTGGGTGTGGAGCGGTGTCCGTTGATTTCTTGGCTACCGTTGATACTTACCCTAAGCCAGATGACAAAATCAGAAGCACCAGCTTGAAGGTTCAAGGAGGTGGCAATACGGGCAATGCTTCAACCTGCCTTGCTCGCTTGGGCCTAAACCCAAGGGTCATCTCCAAGGTTGCAGATGACAGTCAAGGCAGGGGCATATTAGATGAGCTACAGGCTGATGGTGTAGATACATCCTTTATTGTGGTTTCTAAGGAGGGAACTTCACCATTTACGTATATTATTGTGGACAACGAAACGAAGACCCGTACTTGTATACATACCCCAGGATATCCTCCAATGATACCAGATGATCTTCCAGAATCAAGTCTGTTATCTGCATTGGATGGAGCAAGCATGGTATATTTTGATGGGAGATTGTATGAAACTGCTCTAGTTGTTGCTCACGAGGCAGTTAGGAGGAATATACCCATCTTAGTTGATGCAGAAAGGCCGAGGGAAGGGTTGGATGATCTCCTGAAATTAGCGGATTATGTAGTATGCTCAGTGAAGTTTCCAAAGGCATGGACAGAGGCATCAACTGTTCCACGAGCCCTTGTTTCTATTCTTTTAAAGTTGCCCAACATCAAATTTGTGATTGTAACTTTGGGAAAAGATGGTTGTATAATGCTTGAGAGAAGTGTTAATGCAGGTCCTTCCACAGAAGAAGTGGATGTAGACAGCTTATTGGAATCACTGGAGTTAAGAAAGAATAAGAAAGTATCCATTCCAACCTGCATATCATCATCAGTGGCAAAATTGAGAGCAGAAGGGATAGGAACGGTTAGTGGGAAGTTATACGTTGGAACATCTGAGAGCATTCCATCATCAGAGCTTGTTGATACCACTGGTGCTGGAGATGCATTTATTGGAGCTGTTATCTATGCTATCTGTTCGAAGTTTTCACCAGAGACAATGCTATCTTTCGCAGCCAATGTGGCTGGTGCCAAGTGCAGAAAACTAGGAGCACGAAGTGGTCTTCCTTACCGTACTGACCCACGCTTAGCCTCCTTTATTCAGTAA 1230 0.4398 MLTTLPNAASASSASFIFNVQAHPLLQFYNFQSRKHKCRNLRVNMCSHHSLPQNPIVVGCGAVSVDFLATVDTYPKPDDKIRSTSLKVQGGGNTGNASTCLARLGLNPRVISKVADDSQGRGILDELQADGVDTSFIVVSKEGTSPFTYIIVDNETKTRTCIHTPGYPPMIPDDLPESSLLSALDGASMVYFDGRLYETALVVAHEAVRRNIPILVDAERPREGLDDLLKLADYVVCSVKFPKAWTEASTVPRALVSILLKLPNIKFVIVTLGKDGCIMLERSVNAGPSTEEVDVDSLLESLELRKNKKVSIPTCISSSVAKLRAEGIGTVSGKLYVGTSESIPSSELVDTTGAGDAFIGAVIYAICSKFSPETMLSFAANVAGAKCRKLGARSGLPYRTDPRLASFIQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01165 409 Pfam pfkB family carbohydrate kinase 341 397 IPR011611 -
Rops6g01165 409 Pfam pfkB family carbohydrate kinase 60 284 IPR011611 -
Rops6g01165 409 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 350 363 IPR002173 GO:0016301
Rops6g01165 409 Gene3D - 56 394 IPR029056 -
Rops6g01165 409 SUPERFAMILY Ribokinase-like 57 400 IPR029056 -
Rops6g01165 409 PRINTS Ribokinase signature 268 279 IPR002139 GO:0016301
Rops6g01165 409 PRINTS Ribokinase signature 86 105 IPR002139 GO:0016301
Rops6g01165 409 PRINTS Ribokinase signature 59 80 IPR002139 GO:0016301
Rops6g01165 409 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 43 408 - -
Rops6g01165 409 CDD ribokinase_group_B 56 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01165 Rops-Chr6 26425265 26431685 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01165 - - gmx:100802550 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03175 8 69805295 69816427 Rops6g01165 6 26425265 26431685 PCT