Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops6g01068 ATGGGATCATTAGAAAGATCAAAAAAGAAAGTTCAGATATGGAAGAAAGCCATGGTGCATTTTTCTCTCTGTTTTGTGATGGGGTTCTTTACAGGGTTTGCTCCAACAGGTAAATCTATATATCACAGCCATGTTGCTACCTCAAACAGATCAGAATTTGCACCACAACCTATTGAAGTGTCACATGGGACAAAAAATGAAAATAGAAGTTGGATAGCTCCAATGCCAGAGACCATGCACACAAGGTCTATAGTCCATAAACAAAAAACAAAATTTGATGCAAAATCAGAGCCCCAGTTGAAGCCTAGAAGGCTTATAATCATTGTAACTCCAACAAGCACAAAACTTCCCTTCCAAGAAGTGTTTTTGAGAAAGTTGGCAACTACTATAAAGCTGGTATCTCAACCATTGCTTTGGATTGTTGTGGAAGGGCAAACAGATTCCACAGAACTTTCAAAGATACTCAGGAATACTTGCATCATGTATAGGCATTTGGTATCAAAGGAAAACTTCACGGACTTGGAAGCTGAACTGAATCACCAGAGAAATCTTGCACTCAAGCACATTAAGCATCACTGGCTGAGTGGGATTGTGCACTTTGCTGGGCTTTCCAATGTTTATGATCTCGAATTCTTTCAACAACTAAGATATATTGAGTATATCTCTTCCCCTTATATTTTATTTTCATGCGCTACTTCTAGTTCTCTTTTTTTATTATAA 720 0.3778 MGSLERSKKKVQIWKKAMVHFSLCFVMGFFTGFAPTGKSIYHSHVATSNRSEFAPQPIEVSHGTKNENRSWIAPMPETMHTRSIVHKQKTKFDAKSEPQLKPRRLIIIVTPTSTKLPFQEVFLRKLATTIKLVSQPLLWIVVEGQTDSTELSKILRNTCIMYRHLVSKENFTDLEAELNHQRNLALKHIKHHWLSGIVHFAGLSNVYDLEFFQQLRYIEYISSPYILFSCATSSSLFLL* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops6g01068 239 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 103 228 IPR029044 -
Rops6g01068 239 Pfam Glycosyltransferase family 43 126 222 IPR005027 GO:0015018|GO:0016020
Rops6g01068 239 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 222 IPR005027 GO:0015018|GO:0016020
Rops6g01068 239 SUPERFAMILY Nucleotide-diphospho-sugar transferases 104 222 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops6g01068 Rops-Chr6 25121638 25122357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops6g01068 1 230 Glycosyltransferase AT2G37090 52.033 1.30e-76 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops6g01068 K20869 - gmx:100782450 349.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops6g01068 6 25121638 25122357 Rops6g01068 6 25121638 25122357 ECH
Rops8g03279 8 71350740 71351426 Rops6g01068 6 25121638 25122357 PCT