Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g02060 ATGTTGAGGGTTGCAGCTAGGAGGCTATCTTCTCTGTCGTCATCTCCATGGAAGCCCAACCACGCCGCTTCTGCCTACGTCTGTCGGAACACCGTCGTGGATGATGACCGCAGATCTGCTCCTTCCCACGACGTTCCTCATTTCCTTCTTCCCTTTAGAGGTTTTGCTACTGGATCACTGATCGACTCAAAAGAAAACAGCCTTATTCCTGAGATTCCAGCAACTATTGCTGCTGTTAAGAATCCTACTTCTAAGATTGTTTATGATGAGCACAACCATGAAAGATTTCCCCCAGGTGACCCAAGCAAGAGGGCATTTGCATACTTTGTCCTTACTGGTGGTAGGTTTGTTTATGCCTCTTTGATCCGTCTCCTTATACTCAAGTTTGTACTCAGCATGTCTGCTAGTAAGGATGTTCTTGCTATGGCTTCACTTGAGGTGGATCTCTCCAGCATTGAGCCCGGCACTACGGTAACCGTTAAGTGGCGTGGAAAGCCAGTATTCATCAGGCGCCGAACAGAGGATGATATCAAACTGGCAAACAGTGTTGATGTTGGATCTCTTCGTGACCCCCAACCTGATTCAGATAGAGTCAAGAACCCAGAATGGCTCATTGTGATTGGAGTTTGCACACATCTAGGTTGCATTCCATTGCCAAATGCTGGTGACTTTGGTGGATGGTTTTGCCCATGCCATGGATCACATTATGATATTTCTGGCAGAATTAGGAAAGGACCAGCACCATACAATCTGGAGGTTCCCACATATACCTTCATGGAAGAAAACAAATTGATGATTGGTTAA 804 0.4614 MLRVAARRLSSLSSSPWKPNHAASAYVCRNTVVDDDRRSAPSHDVPHFLLPFRGFATGSLIDSKENSLIPEIPATIAAVKNPTSKIVYDEHNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLLILKFVLSMSASKDVLAMASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQPDSDRVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFMEENKLMIG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g02060 267 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 197 265 IPR017941 GO:0051537
Rops5g02060 267 FunFam Cytochrome b-c1 complex subunit Rieske, mitochondrial 137 267 - -
Rops5g02060 267 Gene3D - 136 267 IPR036922 GO:0051537
Rops5g02060 267 Pfam Ubiquinol cytochrome reductase transmembrane region 97 138 IPR004192 GO:0008121
Rops5g02060 267 MobiDBLite consensus disorder prediction 1 20 - -
Rops5g02060 267 Pfam Rieske [2Fe-2S] domain 150 253 IPR017941 GO:0051537
Rops5g02060 267 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 75 267 IPR014349 GO:0051537
Rops5g02060 267 NCBIfam ubiquinol-cytochrome c reductase iron-sulfur subunit 123 267 IPR006317 GO:0008121
Rops5g02060 267 SUPERFAMILY ISP transmembrane anchor 84 140 - -
Rops5g02060 267 CDD Rieske_cytochrome_bc1 144 267 - -
Rops5g02060 267 SUPERFAMILY ISP domain 129 265 IPR036922 GO:0051537
Rops5g02060 267 PRINTS Rieske 2Fe-2S subunit signature 205 216 IPR005805 GO:0016020|GO:0051537
Rops5g02060 267 PRINTS Rieske 2Fe-2S subunit signature 227 239 IPR005805 GO:0016020|GO:0051537
Rops5g02060 267 PRINTS Rieske 2Fe-2S subunit signature 239 251 IPR005805 GO:0016020|GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g02060 Rops-Chr5 44120330 44129598 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g02060 K00411 - gmx:100806917 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02398 8 55512483 55515011 Rops5g02060 5 44120330 44129598 PCT