Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01785 ATGGGGTGCAAAAACACAATTTTCTTGGTACTGGTAGCTACCTTGATCACAAAGGAGGCCTTGGCAACACAACATGTTGTTGGTGGAAGCCAAGGCTGGGATCAATCCACAGACTTTAACTCATGGACTTCAGGCCAAACATTCAAGGTTGGAGATCAACTTGTTTTCAAGTACTCTTCTTTGCATAGTGTGGTTGAACTAGGTAGCGAGAGTTCTTATAAGAATTGTGATATTAGCAATCCAGTCAACTCCTTAAGCAGTGGCAACGATGTTGTCAAATTGGACAAGCCAGGTACAAGGTACTTCACCTGTGGTACCATGGGCCATTGTGGTCAAGGCATGAAGATGAAGATTAAAATAGTAAAAGGGAATGCAGCTTCTTCCCCTGCATCATCACCATCATTATCGCCATCTTCATCTTCATCACCATCATCATCATCTATTGCTTCTTCTACTACTACTACTTCTACTTCAGCTTCAACCCCACAATGCTTGGCCTCTATTATGCTCATCGTTGCAATATCGGTTTCCACAATGCTTACCCTGTTTTAG 552 0.4257 MGCKNTIFLVLVATLITKEALATQHVVGGSQGWDQSTDFNSWTSGQTFKVGDQLVFKYSSLHSVVELGSESSYKNCDISNPVNSLSSGNDVVKLDKPGTRYFTCGTMGHCGQGMKMKIKIVKGNAASSPASSPSLSPSSSSSPSSSSIASSTTTTSTSASTPQCLASIMLIVAISVSTMLTLF* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01785 183 Gene3D - 21 128 IPR008972 -
Rops5g01785 183 PANTHER BLUE COPPER PROTEIN 21 142 IPR039391 GO:0009055
Rops5g01785 183 MobiDBLite consensus disorder prediction 128 159 - -
Rops5g01785 183 CDD Phytocyanin 23 120 - -
Rops5g01785 183 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
Rops5g01785 183 FunFam Blue copper 21 126 - -
Rops5g01785 183 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
Rops5g01785 183 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01785 Rops-Chr5 37413694 37414915 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01785 7 121 Miscellaneous Gene Families AT3G27200 68.696 2.11e-58 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01785 - - gmx:100306337 236.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g01785 5 37413694 37414915 Rops8g02303 8 53014691 53015716 PCT