Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g01784 ATGACTGAGCCTCATCAAGCTCAGGCATCAAGCCGTGGCTTTTCTGGTACAAAAAACGTAGCTGGTAAACCTTCAGTAAATGGTGTATGTGCCTCTTTCGTCATTGTCAACGGCTACAAATGCCAGGAACTTCAAGTTAGAACCAAAGATGGGTACATTCTTAGCCTGCAAAGGATCCCTGAAGGTCGAGCTGAGGTTAGTGGCAATGGGACAAAGAAGGAGCCAGTAATAATACAGCATGGTATATTTACGGGGACTGTGGTAGCTTTGGCATCCTTCTCAGAAGGGAAATTGGTGAATCAACTAAAATCTGCTGCCTTGTTGAGTCCAATTGCCTATTTGAGCCAACATGACCACCGAACTTGTAGTTGTTGCTTTCAAAGCCCATCTTGCTGA 396 0.4495 MTEPHQAQASSRGFSGTKNVAGKPSVNGVCASFVIVNGYKCQELQVRTKDGYILSLQRIPEGRAEVSGNGTKKEPVIIQHGIFTGTVVALASFSEGKLVNQLKSAALLSPIAYLSQHDHRTCSCCFQSPSC* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g01784 131 Gene3D alpha/beta hydrolase 24 84 IPR029058 -
Rops5g01784 131 PANTHER LYSOSOMAL ACID LIPASE-RELATED 33 84 - -
Rops5g01784 131 Pfam Partial alpha/beta-hydrolase lipase region 36 83 IPR006693 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g01784 Rops-Chr5 37393033 37401248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g01784 22 83 Acyl Lipid Metabolism Gene Families AT2G15230 41.935 2.35e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g01784 K01052 - gmx:100779460 106.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02304 8 53023868 53028874 Rops5g01784 5 37393033 37401248 PCT