Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops5g00194 ATGGATCTACAAAGTCCCCAGGAGAATGTGTTTGCAAGTGCTGAAGAAGAGGAAACAACGTCGTCGCCACCTACAAGCTACCAGAGAGGGGATGTTTCTGCTACTACACTGTTGCGCGTGCGGATGTTGCGACAATGTCGGCTTTTGGGTCTACCTCATGCGTTGCTAACACGGATGGTGAAGTTCTGGAAATTGGAAGTTCATTTTCTGATGTGGTGTTGCCTTAAATATGGCATTGCACCTCCCCCTCCATATTCCCAGTTTCTGATGAGAGATTTTAGTGAGAGTATCAGATTACAATTTTCAATCATAAATAAGAATAACCGAAAGAATCGAACTTTGATTACCAATTTCAGCTTCCAATTTGTTGTGTTTCACTTAGATTCCATTCTGGAAAGAATCGAACTTTGGAAGGAAAAAAAGAACCCCATGATGCAACGTTTGGTGGATCATGTTCTCGCTGTTACTAAAGAGTCAGTGAAGACTATTACTTGTGAGTCCTTGAACAATATTGTGAGGATAATCAATGGAGTATCAGCACTTTTGTTGGCATTACTACCTGGGAAAGCTAATATACTTGAAGGTATTCATGGTTGGGAACTCAGGCCAACTTTCCGCGGACCGAGATTTCCCCGTTGGATGGAGAATGGCGTATCCTCGTTCAACCAGTTCATCCATGAACTTTCTGTGGATTCTGATAATTCAAGCCCTGAATACTCATCTGAAGAAGAAGACAGTGACAGATATGAATATCCTCCGTCTCCTGCATCTCATTGTTCTAGAGCCTCTGAAGCTGGTTTTAACAAACACAGTAGGCATCAGATGGATTGGATCCAGTTTATCTTATTTTGGATTTTGTTTCCTATAAGGTTATTGCTGGGGATTCCATTTCGTCTATTCCGGTTAGCTTACTCCGGGGTGTCAAAAGCCCTGTTTGTCTCTAGAAACAAGCACCCTTCACGTGTACATGCACATAAGAGGGTGCAAAGCCTCAAGGACCACATTATCCACTGCACTACTGACAGGAGACGAGGAGTTGTAGAGGATCTTCATCTAGCCATAGAGATATGTATAGAAGCTGTCTTTGATGTTGTTCACAAGACAGCACATCTTCTTCTTTCCCCATCAGAAGCTTTGGGGACATTATCGAGGTTGTTTTCATCTCATGAAAGTGGCTTTGACGAAGATCACAATGGTTTTGAGGATGCCTTCAATTCTCCAGCTACACTGGGAGAGAATGACCGAACACCTACAGAGAGGAATACCAATTATCAGTCTCTGAATACAGATGCCCGGACATGTCAGGATGTCATAACCGATCTTGGGTATCCATACGAAGCAATTCATGTGATCACTTCTGATGGATATATTCTTCTTTTGGAAAGAATACCTAGGCGAGATTCACGAAAAGTTGTTTATCTTCAGCATGGGGTTTTGGATTCATCAATGGGTTGGGTATCTAATGGTGTAGTTGGCTCTCCAGCTTTTGCGGCCTATGATCAAGGGTATGATGTATTTATTGGGAATTTTCGTGGTTTGGTTTCTAGGCAACATGTCAACAAGAACATATCATCACGTCAATACTGGCACTACTCCATCAATGAGCATGGGACTGAGGATATTCCTGCTATGATAGAGAAGATTCATCAAGTAAAAACTGCTGAATTGAGGCTTAGTAAACCTGATATTGAGGAGGAAACTAATGATGATCAGCCTTACAAGCTTTGTGCAGTTTCTCATAGTTTGGGAGGAGCTGCTATGATGATGTATATTATTACTCGAAGGATAGAGGAGAAGCCTCATAGACTTTCAAGACTGGTTTTATTATCACCTGCTGGTTTTCATGATGACTCTAACATAGTTTTTTCCGCAGCAGAGCTGCTATTAGTTTTGCTGGCTCCTGTTTTGTCTCTTTTTGTGCCTGCCTTTTATATACCAACCAGATTTTTTCGTATGCTAGTCAACAAGTTAGCTAGGGATCTGCATAACCTACCTGCAGTTGGAGGACTTGTTCAAACTTTAATGAGTTATGTTGTTGGTGGAGACAGCTCAAATTGGGTTGGAGTTTTAGGATTACCACACTACAACATGAATGACATGCCAGGAGTATCTTTTCGTGTTGCTCTCCATCTTGCACAGATGAAGCGTAGTGGAAGATTTAGAATGTTTGATTATGGGAGTGCATCTACCAATAAGGAGGTGTATGGTTCACCTGAGCCTTTGGACTTGGGTGAATACTATGGACTCATTGACATTCCTGTTGATCTTGTTGCTGGACAGAAAGACAAAGTGATAAGACCTTCAATGGTAAAGAGACACTATAGATTGATGAAAGGTGGTGGGGTAGATGTTTCATATAAGAAGTTTGAATATGCTCATTTGGACTTCACCTTCTCTCACCATGAAGAACTCTTGTCATATGTCATGTCACGCTTGCTACTTGTGGATCCAAATCCAAAGCATCAAGTGAATCAAAGGGTTGCAAGATCAAGGAGGAAAGGACAAGTTGTAACTAGCGGGTAG 2523 0.4174 MDLQSPQENVFASAEEEETTSSPPTSYQRGDVSATTLLRVRMLRQCRLLGLPHALLTRMVKFWKLEVHFLMWCCLKYGIAPPPPYSQFLMRDFSESIRLQFSIINKNNRKNRTLITNFSFQFVVFHLDSILERIELWKEKKNPMMQRLVDHVLAVTKESVKTITCESLNNIVRIINGVSALLLALLPGKANILEGIHGWELRPTFRGPRFPRWMENGVSSFNQFIHELSVDSDNSSPEYSSEEEDSDRYEYPPSPASHCSRASEAGFNKHSRHQMDWIQFILFWILFPIRLLLGIPFRLFRLAYSGVSKALFVSRNKHPSRVHAHKRVQSLKDHIIHCTTDRRRGVVEDLHLAIEICIEAVFDVVHKTAHLLLSPSEALGTLSRLFSSHESGFDEDHNGFEDAFNSPATLGENDRTPTERNTNYQSLNTDARTCQDVITDLGYPYEAIHVITSDGYILLLERIPRRDSRKVVYLQHGVLDSSMGWVSNGVVGSPAFAAYDQGYDVFIGNFRGLVSRQHVNKNISSRQYWHYSINEHGTEDIPAMIEKIHQVKTAELRLSKPDIEEETNDDQPYKLCAVSHSLGGAAMMMYIITRRIEEKPHRLSRLVLLSPAGFHDDSNIVFSAAELLLVLLAPVLSLFVPAFYIPTRFFRMLVNKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLAQMKRSGRFRMFDYGSASTNKEVYGSPEPLDLGEYYGLIDIPVDLVAGQKDKVIRPSMVKRHYRLMKGGGVDVSYKKFEYAHLDFTFSHHEELLSYVMSRLLLVDPNPKHQVNQRVARSRRKGQVVTSG* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops5g00194 840 SUPERFAMILY alpha/beta-Hydrolases 432 806 IPR029058 -
Rops5g00194 840 PANTHER LYSOSOMAL ACID LIPASE-RELATED 304 813 - -
Rops5g00194 840 MobiDBLite consensus disorder prediction 230 262 - -
Rops5g00194 840 MobiDBLite consensus disorder prediction 404 426 - -
Rops5g00194 840 MobiDBLite consensus disorder prediction 1 29 - -
Rops5g00194 840 FunFam Gastric triacylglycerol lipase 423 813 - -
Rops5g00194 840 Gene3D alpha/beta hydrolase 422 813 IPR029058 -
Rops5g00194 840 Pfam Partial alpha/beta-hydrolase lipase region 435 489 IPR006693 GO:0006629
Rops5g00194 840 MobiDBLite consensus disorder prediction 409 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops5g00194 Rops-Chr5 3020019 3026691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops5g00194 145 824 Lipid Metabolism Gene Families AT1G18460 68.567 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops5g00194 - - gmx:100785917 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops5g00194 5 3020019 3026691 Rops5g00194 5 3020019 3026691 ECH
Rops2g00252 2 3994256 3998845 Rops5g00194 5 3020019 3026691 PCT