Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g00252 ATGCAACGTTTTGTTGACAACGTCCTCGCTGTTACTAAAGAGTCGGTGAAGACGTTTACTTATGAGTCATTGAACAATATTGTGAGGTTGATCAATGGAGTATCAGCTCTTTTGTTAACATTACTACCTGGCAAAGCTACCATACTCGCAGGTATTCAAGGTTGGGAACTCAGACCAACTTTCCGTGGACCACGATTTCCACGTTGGATGGAAAATGGTGTGTCCTCTTTCAACAAGTTTGTTCACGAACTATCTGTGGATTCTGATACTTCAAGCCTGGAATACTCATCTGGGGAAGAAGATAGTGATGGGTATGAATCTGCTGAATCTCTTTCACCTCAAAGTTCTAGAGCCTCTAGAGCTAGTTTTACCGATTATGGTAGGCGTCAGATGGATTGGATCCAGTGTATTTTACTTTGGATTTTGGTTCCTGTAAAATTCTTGCTGGGGATTCCATTTCTTCTTTTCAAGTTAGCTTATTCTGGGGTCTCAAAACCGTTGTCTACTACCTCTGGAAATCAGCACTCTACACAATTACATTCACATATGCAAAGCCTCAAGGACCAAATTATCCATCGTACTACTGATAGGAGACGTGGGGTTGTAGAGGATCTTCATTTAGCCATGGAGATATTTATAGAAGCCGTGTTTGATTTTGTTCACAAGGCAGTAGATCTTCTTTTTTCCCCATCACAAGCTTTTGGAGCATTATTTAGGTTGTTTTCATCTCATAAAAGAGGTGTGAAAGATGATAAGGATGGTGTTGAGGAGGCCTCCACTTCTACAGCTACACTTGGAGAGAATGATCCAAAACCTACAGAAAGGAAGACTAGTTTTCGACAGTCTATGAACACAGATGCCCGGACATCTCAGGATGTCATAACAGAGCTTGGGTATCCATATGAAGCTATTCATGTGATCACTAAAGATGGATATGTTCTTCTTTTAGAAAGAATACCGAGGCGAGATGCTCGAAAAGCTGTTTATCTTCAGCATGGAGTTTTGGATTCATCAATGGGTTGGGTAGCTAATGGTGTTGTTGGGTCTCCAGCTTTTGCAGCCTATGATCAAGGATATGATGTGTTTTTGGGAAACTTTCGTGGTTTGGTTTCTAGGGAACATGTCAACAAGAACATCTCATCACGTGAATACTGGAGATACTCCATTAATGAACATGGGACTGAGGATATTCCTGCTATGATAGAGAAAATCTATCAAATAAAAACAGCTGAGCTGAAGCTTAGTAAACCCGGCATCGAGAATGATACTAATGATGATCAGCTTTTCAAGCTTTGTGGAATTTGCCATAGTTTGGGAGGAGCTTCTATGTTGATGTATGTTATTACGCGTAGGATACAACAGAAGCCTCATAGACTTTCTAGATTGATAATGTTATCACCTGCTGGTTTTCATCATGACTCTAACCTAATTTTTTCTGCGGCGGAGCATGTAGTATTTTTGCTGGCTCCTATTTTGTCTCGTATTTTCCCAGCCTTCTATATACCAACCAGATTTTTTCGTATGCTTGTTAACAAGTTAGCTAGGGACCTTCAAAACCTACCAGCAGTTGGAGGATTGGTTCAAACTTTAGTAGGTTATGTTGTTGGTGGGGACAGCTCAAATTGGGTTGGAGTTTTAGGATTACCACATTACAACATGAATGACATGCCAGGAGTGTCTTTCTATGTTACTCTCCATCTTGCACAGATAAAGAGAAGTAGAAGATTTAGAATGTTTGATCATGGAAGTGCATCTGCTAACATGAGGGTGTATGGTTCACCTGAGCCTTTGGACTTGGGTGAACACTACGAGCTCATAGACATTCCTGTTGATCTGGTTGCTGGTCAGAAAGACACAGTGATAAGACCTTCAATGATAAAGAGACATTATAAATTGATGAAGGAAACTGGTGTGGAAGTGTCATTTAAGGAGTTTGAATATGCTCATTTGGACTTTACCTTCTCTCACCGTGAAGAACTTTTGTCATATGTCATGTCACGTTTGCTGCTTGTGGAGCCCAATCCAAAGCATCAAGTAAATCAAAGGGCTTTAAGATCGAGGAAGAAAGAACAGGTCTCTGTTAGTGGGTAG 2091 0.4065 MQRFVDNVLAVTKESVKTFTYESLNNIVRLINGVSALLLTLLPGKATILAGIQGWELRPTFRGPRFPRWMENGVSSFNKFVHELSVDSDTSSLEYSSGEEDSDGYESAESLSPQSSRASRASFTDYGRRQMDWIQCILLWILVPVKFLLGIPFLLFKLAYSGVSKPLSTTSGNQHSTQLHSHMQSLKDQIIHRTTDRRRGVVEDLHLAMEIFIEAVFDFVHKAVDLLFSPSQAFGALFRLFSSHKRGVKDDKDGVEEASTSTATLGENDPKPTERKTSFRQSMNTDARTSQDVITELGYPYEAIHVITKDGYVLLLERIPRRDARKAVYLQHGVLDSSMGWVANGVVGSPAFAAYDQGYDVFLGNFRGLVSREHVNKNISSREYWRYSINEHGTEDIPAMIEKIYQIKTAELKLSKPGIENDTNDDQLFKLCGICHSLGGASMLMYVITRRIQQKPHRLSRLIMLSPAGFHHDSNLIFSAAEHVVFLLAPILSRIFPAFYIPTRFFRMLVNKLARDLQNLPAVGGLVQTLVGYVVGGDSSNWVGVLGLPHYNMNDMPGVSFYVTLHLAQIKRSRRFRMFDHGSASANMRVYGSPEPLDLGEHYELIDIPVDLVAGQKDTVIRPSMIKRHYKLMKETGVEVSFKEFEYAHLDFTFSHREELLSYVMSRLLLVEPNPKHQVNQRALRSRKKEQVSVSG* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g00252 696 SUPERFAMILY alpha/beta-Hydrolases 289 665 IPR029058 -
Rops2g00252 696 MobiDBLite consensus disorder prediction 248 285 - -
Rops2g00252 696 Pfam Partial alpha/beta-hydrolase lipase region 292 345 IPR006693 GO:0006629
Rops2g00252 696 Gene3D alpha/beta hydrolase 277 669 IPR029058 -
Rops2g00252 696 PANTHER LYSOSOMAL ACID LIPASE-RELATED 180 669 - -
Rops2g00252 696 FunFam Gastric triacylglycerol lipase 279 669 - -
Rops2g00252 696 MobiDBLite consensus disorder prediction 91 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g00252 Rops-Chr2 3994256 3998845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g00252 1 680 Lipid Metabolism Gene Families AT1G18460 67.299 0.0 904
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g00252 - - gmx:100779931 1097.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g00252 2 3994256 3998845 Rops2g00252 2 3994256 3998845 ECH
Rops2g00252 2 3994256 3998845 Rops5g00194 5 3020019 3026691 PCT