Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01525 ATGATCAAAAGGCTTTCTCTGGGTTCTGATTCTTCTTCTGTGGCGCAAATTTTTCTGAGGAAAAAAGGCCAAATATTTGAAACCATGTCCACCATGAAGAACAATCACAAAGACCCAGAAAATCATCTTTACTCTTCATGGAGCTTTTCAAAGCTAATGGCTTTTTTCTTTCTCTTAATCTCCATCTCTTACCTCTTCTATTCCCTTAGATTTGTTAGTCATTCCTATGACTGTGATCAAAACCCCAACATTCCCATTATCCATAGCACTTTCCCATCTGAAGAAGAGTCACCAAAGCCCTTTGAAGAAACCAACATTTCCCACATAGTTTTTGGCATAGGAGCCTCAGCAAAGCTATGGAAAAAAAGGAAAGAGTACATCAAGCTTTGGTGGAAGCCAAATCAAATGCGTGGCATAGTGTGGTTGGAGCAAAAGGTGAAAACTGAGCCTGGTGATGAGAATCTCTTACCCCAATTAAGGATCTCAGAAGACACATCAAAGTTCAAGTACAAGAATCCAAAGGGGCATAGATCTGCCATAAGGATCTCACGCATAGTGTCAGAAACAGTGAGGCTTGGGATGGAGGGTGTGAGGTGGTTTGTGATGGGGGATGATGACACAGTTTTTGTCACTGAAAATTTGGTTAAGGTTTTGCAAAAATATGATCACAATCAATTCTATTACATAGGGAGTTCTTCAGAGAGTCACTTGCAAAATATTTACTTTTCTTATAATATGGCTTATGGGGGTGGTGGGTTTGCTATAAGTTATCCATTAGCTGTAGCATTAGAGAAAATACAAGACAGGTGCATCCAAAGGTACCCTGGATTGTATGGTTCTGATGATAGGATTCAAGCTTGCATGGCAGAACTTGGGGTTCCACTCACCAAGGAAAAAGGGTTTCATCAGTTTGATGTATACGGCAATCTCTTTGGGCTTTTGGCTGCCCATCCCGTTTCACCACTGGTCTCACTCCATCACTTGGACGTGGTGGAGCCCATATTTCCAAACGTGAGCCGGGTCCAAGCCCTAAAGAGGCTCAAGGAGCCCATGAAATTGGACCCTGCTGGGCTCATGCAACAATCCATTTGCTATGACAAAACCCGGACTTGGACCATATCCATTTCTTGGGGCTATGCGGTTCAAATATTCCGGGGCATTTTCTCTGCCCGGGAAATGGAAATGCCTGCAAGAACCTTCCTTAATTGGTACAAGAGAGCTGATTACACTGCCTATCCATTTAACACACGCCCCGTCAGCCGGAATGTTTGTCAGAAACCGTTTGTTTTTTACTTGTCTAAGGCAATCTATAAGGAAGATACCGATGAGACTGCGAGTCAGTATGTTCGGGTTCACCCGAACCCGGAATGCAAGTGGAAAATGGAGGATCCGACTCAAATCGAAGTAGTGGAGGTTTATAAGAGACCCGACCCGAATTTGTGGGACAAGTCTCCAAGAAGAAATTGTTGCAGGGTTCGACGTACAAAGAAGAAAGGAACTTTGGTGATTAATGTGGGGGAATGTAGGGAAGGTGAAGTTGTTCAATTGTAG 1551 0.4326 MIKRLSLGSDSSSVAQIFLRKKGQIFETMSTMKNNHKDPENHLYSSWSFSKLMAFFFLLISISYLFYSLRFVSHSYDCDQNPNIPIIHSTFPSEEESPKPFEETNISHIVFGIGASAKLWKKRKEYIKLWWKPNQMRGIVWLEQKVKTEPGDENLLPQLRISEDTSKFKYKNPKGHRSAIRISRIVSETVRLGMEGVRWFVMGDDDTVFVTENLVKVLQKYDHNQFYYIGSSSESHLQNIYFSYNMAYGGGGFAISYPLAVALEKIQDRCIQRYPGLYGSDDRIQACMAELGVPLTKEKGFHQFDVYGNLFGLLAAHPVSPLVSLHHLDVVEPIFPNVSRVQALKRLKEPMKLDPAGLMQQSICYDKTRTWTISISWGYAVQIFRGIFSAREMEMPARTFLNWYKRADYTAYPFNTRPVSRNVCQKPFVFYLSKAIYKEDTDETASQYVRVHPNPECKWKMEDPTQIEVVEVYKRPDPNLWDKSPRRNCCRVRRTKKKGTLVINVGECREGEVVQL* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01525 516 Gene3D - 97 351 - -
Rops4g01525 516 PANTHER FRINGE-RELATED 50 513 - -
Rops4g01525 516 FunFam Fringe-related protein-like 96 352 - -
Rops4g01525 516 Pfam Protein of unknown function, DUF604 238 490 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01525 Rops-Chr4 38188248 38192459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01525 34 511 Glycosyltransferase AT5G41460 63.636 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01525 - - gmx:100789583 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01525 4 38188248 38192459 Rops4g01525 4 38188248 38192459 ECH
Rops8g01047 8 22411242 22416357 Rops4g01525 4 38188248 38192459 PCT