Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01508 ATGTCTTTCAGTTCGATTCGGTGGTGTCATCTCAATCTGAATCTTCTCTATGCTTTGTTGTTGCTTTTTTGTTGTTCACTTGGTCTCAGTTCTGCAAATGATGAACTGGGTGGCACTGATGACACCTTCACTGTTTCCAGCTTCAGTTACCCTGAGACTACCCTTAGACCTTTTGATTTGCGCTATATCAGAGTTTATGTACCGCCATGGTTTTCGGCAGTGTCCATAGCATTGAACTCAGATGTAGACCTTGATGTTACAAAAGTTGAAAGGATTCCAAAAAGTACTTTGCCAATAATATGCTTTAGAGATGGCAGTCCTCCTCTACCAGATGCTTTAAATACCTCTCTGAAAGATTCAGCTGTCTCAGGAATAAATGGTCTTGATGTGGAGCAGTGCTTTCCTATGGAGAAAAATATCACTATGAAATTGACAAATGAGCAGATTTCTCCAGGTGCTTGGTACGTTGGTCTTTTCAATGGCATTGGAGCTATGAGGACACAATCTAAGATGATTATCCGAGGCTCAGCATATTCCTTCAGTGCCAATATAAGTGTGGAAGCATGCACAAATTCAATGATGAGGGGGGAGTTCTGTAACAGTACAGTATATCCACTTTCATGCGCAGCATCTGATGACTATAGTTCTTTCAAGGCTACAGTGAAGAAGCCAATGATGGAAAATGTGATGACCTGCAAAAGTAACTCTGAAAGTTTTTGTGTTCAGGAAGGTGTACCAAACTTTTACTCCTTGGATATAGCAAATATGGCAGAAGAATTGACCATTATGGCAGCAAATGTCAGATTCAATACTACACCTTCAAATAACGCTTCTGGTGCAGATGATGTAAATTTAATGTGTTTTGCTCGCCATGGTGCAATGCCTTCACAGACTTTGCATGATTATTCCAGTGATTTAAATAAAGCCCCTCTGGTTATTCGTTCTCCACCAATTGGTCGTTTGTACATCAGTATATTACCGGTTAATCTTACAAACAGGTTTGGGGGGACTCAGGATGGTGATGTAAAAGTTTGCTATTCGATGGAATCACAAGTGCTTCAGTGTCCACTTGGGAAAGCTGGACCAAATTGCACAATGGGTAGCTACACACTTCAGACAGTTTTAAGGAGAGGTCCAACCCCCTTTGAATCATATTATTTACCTGTTGGTGAAGGAGCATCTTCTGCCAAGTTTCCTCTCGAGCCACTTTCAAACAGCTCATTAAATGAAGGAGAAACTGATGACATTTGGACTTACTTTACCTTAGACATTCCTCTTGGTGCAGCTGGACGAAATATTCACATACGGTTATCCTCAGATGTGAAGATCAGTTATGAAGTTTATGCTAGATTTGGTGGATTGCCTTCTCTTGATAGCTGGGACTATTATTATGCTAACAAGACAAGGAAGAGTGATCAATCCATGTTTTTCATGCTATATGATTCAAGTGACGACAACATTGATTTTTACATTATTTATGCTAGAGAAGGAACTTGGGGTGTCGGTCTAAGACATCTTAAAACCAGCACTGATTCTTTGAAACGGCAAACTTTCATGTCTATTTCACTTGAAGGATGCCCAAAACAATGCTCCTCTCATGGGGACTGCAGATATTCTTTTGATGCTAGTGGATTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGTGGCTTTGACTGTAGCATTGAAATTGTATCACATAAAGGGCATATACTGCAATCAATTTTTCTCATTGGATCAAATGCAGCAGCCATACTTCCTGCCTATTGGGCCCTACGGCAGAAGGCATTTTCAGAATGGGTTTTATTCACTTGCAGTGGAATTTCAAGTGGATTATATCATGCTTGTGACGTAGGCACCTGGTGTGCATTGAACTTTAATGTTCTACAGTTCATGGACTTCTGGCTCTCTTTCATGGCTGTGGTTAGCACTTTTGTATATCTAGCTACCATTGATGAAGTATATAAGAGGGCAATCCACACAGCTGTTGCTATCCTTACTGCTCTCTTGGCTGCAACTAAGGCAACCAGGTCTTCCAATATTGTTCTTGTGATTATGATTGGGGCTCTTGGTCTTCTTATTGCTTGGTTGATAGAAATCTCAATAAAGTATAGGTCCCTTTCCTTTTCATTTGGATTCTCACTAAGTTTCAATCAAAGTTTGATAAATATAAAGCAATGGCTCTGTAATATGGTCAAGACACTTTTGAGAAGGTTCCAGTGGGGTTTTTTATTGGTCGGTTTTGCAGCATTGGCCATGGCAGCAATAAGCTGGTCACTTGAAACCAGTGAAAACTACTGGTTTTGGCATAGCTTGTGGCATGTTACAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAAATACTGTTGATGCTGAGAATCAGCTACCTACAAGTGGAAACTATGCACTGACTCGTCAGGATTCATTTCCTAGAAGTAATTAG 2457 0.4025 MSFSSIRWCHLNLNLLYALLLLFCCSLGLSSANDELGGTDDTFTVSSFSYPETTLRPFDLRYIRVYVPPWFSAVSIALNSDVDLDVTKVERIPKSTLPIICFRDGSPPLPDALNTSLKDSAVSGINGLDVEQCFPMEKNITMKLTNEQISPGAWYVGLFNGIGAMRTQSKMIIRGSAYSFSANISVEACTNSMMRGEFCNSTVYPLSCAASDDYSSFKATVKKPMMENVMTCKSNSESFCVQEGVPNFYSLDIANMAEELTIMAANVRFNTTPSNNASGADDVNLMCFARHGAMPSQTLHDYSSDLNKAPLVIRSPPIGRLYISILPVNLTNRFGGTQDGDVKVCYSMESQVLQCPLGKAGPNCTMGSYTLQTVLRRGPTPFESYYLPVGEGASSAKFPLEPLSNSSLNEGETDDIWTYFTLDIPLGAAGRNIHIRLSSDVKISYEVYARFGGLPSLDSWDYYYANKTRKSDQSMFFMLYDSSDDNIDFYIIYAREGTWGVGLRHLKTSTDSLKRQTFMSISLEGCPKQCSSHGDCRYSFDASGLTSYSFCSCDRNHGGFDCSIEIVSHKGHILQSIFLIGSNAAAILPAYWALRQKAFSEWVLFTCSGISSGLYHACDVGTWCALNFNVLQFMDFWLSFMAVVSTFVYLATIDEVYKRAIHTAVAILTALLAATKATRSSNIVLVIMIGALGLLIAWLIEISIKYRSLSFSFGFSLSFNQSLINIKQWLCNMVKTLLRRFQWGFLLVGFAALAMAAISWSLETSENYWFWHSLWHVTIYTSSFFFLCSKANTVDAENQLPTSGNYALTRQDSFPRSN* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01508 818 ProSitePatterns EGF-like domain signature 1. 551 562 IPR000742 -
Rops4g01508 818 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 11 816 IPR021910 GO:0016020
Rops4g01508 818 Pfam Protein of unknown function (DUF3522) 572 777 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01508 Rops-Chr4 37956482 37972168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01508 - - gmx:100777848 1368.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g01098 8 23351073 23359938 Rops4g01508 4 37956482 37972168 PCT