Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05243 ATGCCGCCGGCACTGATTGATCCACCATTGCCAAAATCATCGTCGGTGCCGTCTATAAGCTCCGACACCGTTTCTCTGGGATCGGCGCCGGAGAATCAGCGATTTGGTGATCGTAGAGGTTTGCAGTGGCGTATTAATCTCGGGGTTTTGCCATCTTCTTCTTCTTCTTCTTCAACTTCCATTGATGATCTTCGTCGTGCCACAGCTAATTCTAGAAGAAGGTATGCCGGTTTGAGACGGCGCCTCTTGGTTGATCCTCATATTCCAAAGGAGGGAAGCAGTTCACCCAACCTTGCCGTAGACAACCCACTTTCACAAAATCCAGACAGTACATGGAGTCGCTTTTTCCGCAATGCAGAGCTGGAGAGGATGGTGGATCAAGATTTATCTCGTTTATACCCAGAACATGGAAACTATTTCCAAACACCAGGATGCCAAGGCATATTAAGACGAATTTTATTACTATGGTGTCTCAGACACCCAGAGTGTGGTTATAGACAAGGAATGCATGAATTACTTGCTCCGCTGCTGTATGTTCTCCAAGTTGATGTGGAGCATCTTTCAGAAGTTCGAAAGCTTTATGAAGATCACTTCACAGACAGATTTGATGGTCTCATTTGTCAAGAGAATGATCTTTCTTACAAATTTGATTTTAGAAAATCTTCAGACTTGATGGAGGATGAAATCAACTCCCATGGAAATGCAACGAAAATCTGTAGTCCTGATGAGCTTGATCCTGAGATACAGACAATTGTATTGCTAAGTGATGCTTATGGGGCTGAAGGTGAACTTGGCGTTGTTTTATCTGAGAAATTTATCGAACATGATGCTTACTGTATGTTTGATGCTTTAATGAATGGGGCTCATGGTTCAGTTGCAATGGCCGATTTCTTCTCTCATTCCCCTGTAGCTGGGTCTCATACTGGTTTGCCTCCTGTAATTGAAGCTTCTGCAGCATTGTATCATTTGTTGTCTCATGTGGATTCATCTCTGCATAGCCATCTTGTTGATCTCGGGGTGGAACCCCAGTACTTTGCTCTCCGCTGGTTGAGAGTTGTGTTTGGACGTGAATTTTCACTTGACAACCTCTTGATCATCTGGGATGAGATCTTTTTATCAGAGAATGGTAAAGTGGAAAAGCATGCTGAGGACAGCACTGATTCTGGTTTTAGGATCTTACATTCATCTCGTGGGGCATTTATCTCAGCTATGGCTGTAGCGATGTTACTTCATTTAAGATCTTCACTTCTCGCGACTGAAAATCCTACAATCTGTCTCCAGAGATTATTGAGCTTTCCTGAGAACACTAACATTGAGAAACTAATAGAGAAGGCTAAATCCTTGCAGGCTCTTGCATTAAGTACTGATATTTCATCCTCAACACCTTCGCTTGTAGAGTATCACTACCAGGGTACATCAGTTATGACAAGATCTCTTACCCTTCCATCTGAATCAGTTTCACCAAAAACTCCTCTGAATTTGTTTCCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGTCCACAGGAATGAAGAACTTAAACAAGATGGAGTAGAAAAACAGGTTCCAACTCGGAAAAAGAGATGGACAGAAAAGGTAAAGTTAAGTTTGAAAAGAGCAGATTCTGACCCATCTTCATCAAGGATTAAGAGTGGTGGTAAAAAGGATTCCAAGGCATCTGTTAAGCGCAGTTTGTTAGAAGATCTTTCTAAGGAACTTGGCTCAGAGGAAGATACAGAAAAACTACACAATCATGAACAGGAAAATCTTTCAGTAGCAGATGAAGTGGAGCAACAAGATGATGCCTCTCAAGGTGGTAACAATTACTGTGCTGAGGATGGATGTATAAATGGAAACACTGGCAGTGAGGAAAACTTCTCTGGCCCAGCTAGTCCTCCTAATGAGGCCAATGATCACGAAAATGTCTCAGAGAAAAGTAGTGTTGCATCTAATTTTTCCCATGATCAAATCAATGAAACTTCACATAGTAGCCCCATTGATTCACCTCTTCCAATCTCTGATCATCCCGAGAACATATCTCAGACGTCAGGGTGCAATAATGATTCCACAGTAAATTCGGCCACACATTCTAAGGAGAGAAAACTGAATAGATTCCATTGGCTTTGGAAGTTTGGCAGGAACAATGGCGAATTTACGTCTGAGAAAGGAAGAGGTACTTCGGAGGACATAAAACCTGCCAACAATTGTAATAATCAAAATAAAACAACACCCTCTTCTATAGCTGATGGGCACTGTAGTTCTGTTAGTTGCAAAGGGGAATCTGTAGACCAGAATGTGATGGGCACTTTGAGGAATATTGGGCAGTCTATGCTTGAGCATATTCAGGTGATTGAGTCTGCTTTCCAACAAGACCATGGCCAAGGAGCTTCATTGGATAACATGTCTAAAAATGTTATGGTTGGCAAAGGGCAGGTTACTGCCATGTCAGCTCTCAAGGAGCTAAGAAAAATTAGTAATCTTTTGTCTGAGATGTGA 2496 0.4215 MPPALIDPPLPKSSSVPSISSDTVSLGSAPENQRFGDRRGLQWRINLGVLPSSSSSSSTSIDDLRRATANSRRRYAGLRRRLLVDPHIPKEGSSSPNLAVDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGNYFQTPGCQGILRRILLLWCLRHPECGYRQGMHELLAPLLYVLQVDVEHLSEVRKLYEDHFTDRFDGLICQENDLSYKFDFRKSSDLMEDEINSHGNATKICSPDELDPEIQTIVLLSDAYGAEGELGVVLSEKFIEHDAYCMFDALMNGAHGSVAMADFFSHSPVAGSHTGLPPVIEASAALYHLLSHVDSSLHSHLVDLGVEPQYFALRWLRVVFGREFSLDNLLIIWDEIFLSENGKVEKHAEDSTDSGFRILHSSRGAFISAMAVAMLLHLRSSLLATENPTICLQRLLSFPENTNIEKLIEKAKSLQALALSTDISSSTPSLVEYHYQGTSVMTRSLTLPSESVSPKTPLNLFPDSYWEEKWRVVHRNEELKQDGVEKQVPTRKKRWTEKVKLSLKRADSDPSSSRIKSGGKKDSKASVKRSLLEDLSKELGSEEDTEKLHNHEQENLSVADEVEQQDDASQGGNNYCAEDGCINGNTGSEENFSGPASPPNEANDHENVSEKSSVASNFSHDQINETSHSSPIDSPLPISDHPENISQTSGCNNDSTVNSATHSKERKLNRFHWLWKFGRNNGEFTSEKGRGTSEDIKPANNCNNQNKTTPSSIADGHCSSVSCKGESVDQNVMGTLRNIGQSMLEHIQVIESAFQQDHGQGASLDNMSKNVMVGKGQVTAMSALKELRKISNLLSEM* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05243 831 MobiDBLite consensus disorder prediction 1 37 - -
Rops2g05243 831 Gene3D - 313 456 - -
Rops2g05243 831 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 38 334 IPR035969 -
Rops2g05243 831 ProSiteProfiles TBC/rab GAP domain profile. 33 374 IPR000195 -
Rops2g05243 831 MobiDBLite consensus disorder prediction 533 563 - -
Rops2g05243 831 SMART tbc_4 25 420 IPR000195 -
Rops2g05243 831 Pfam Rab-GTPase-TBC domain 274 375 IPR000195 -
Rops2g05243 831 Pfam Rab-GTPase-TBC domain 122 181 IPR000195 -
Rops2g05243 831 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 105 291 - -
Rops2g05243 831 FunFam TBC1 domain family member 5 313 457 - -
Rops2g05243 831 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 309 449 IPR035969 -
Rops2g05243 831 MobiDBLite consensus disorder prediction 13 30 - -
Rops2g05243 831 MobiDBLite consensus disorder prediction 613 693 - -
Rops2g05243 831 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 36 430 - -
Rops2g05243 831 MobiDBLite consensus disorder prediction 590 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05243 Rops-Chr2 93550013 93555475 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05243 K18469 - gmx:100816501 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05243 2 93550013 93555475 Rops2g05243 2 93550013 93555475 ECH
Rops2g05243 2 93550013 93555475 Rops11g01728 11 27265634 27271523 PCT