Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01728 ATGCCGCCGGCGATGGTGGATCTGTTGTTGCCGTCTCCTCCTCCTCCGAGCTCCGACTCCGTTCACCGGAGATTGGCGCCGGAGAATCGGCGATTCGGTGATCTTAGAGGGTTGCAGTGGCGAATAAATCTTGGGGTGTTGCCATCTTCGTCTTCAACTTCCATTGATGATCTTCGTCGGGTCACAGCTGATTCTAGAAGAAAGTATGCCAGTTTGAGAAGGCGCCTCCTTGTTGAACCGCATGTTCCAAAGGATGGAACTAATTCACCCAATCTTGTCATGGACAATCCACTTTCACAAAATCCAGATAGTACATGGAGTCGCTTTTTTCGCAATGCAGAGCTGGAGAGAATGGTTGATCAGGATTTATCACGTTTATACCCAGAACATGGCAGTTATTTTCAGACACCAGGATGCCAAGGCATGTTGAGACGAATCTTATTATTATGGTGTCTCAGGCACCCAGAATGTGGTTATAGGCAAGGAATGCATGAATTACTTGCTCCTCTGCTTTATGTTCTCGAAGTTGATTTGGAGCGTTTTTCAGAAGTTCGGAAGCTTTATGAAGATCACTTCACAGACAGATTTGATTGCCTTTTATGTCAAGAGAGTGATCTTTCTTACAGTTTTGATTTTAGGAAATCTCCAGATTTGATGGGGGATGAAATTGGCTCCCACGGAAATGCAATGAAAGTCAATAGTATTGATGAACTTGATCCTGAGATTAGGACCATTGTATTGCTAAGTGATGCATATGGAGCCGAAGGTGAACTAGGCATTGTTTTATCTGAGAAATTTATGGAACATGATGCTTACTGTATGTTTGATGCTTTAATGAATGGGGCCCATGGTTCAGTTGCAATGGCCGATTTCTTCTCTTCCTCCCCGGTAGCTAGGTCCCATACTGGTCTGCCTCCTGTGATTGAAGCTTCTATTGCATTGTATCATTTGTTGTCCCTTGTGGATTCATCTCTGCATAGCCATCTTTCTGATCTTGGGGTTGAACCGCAGTACTTTTCTCTCCGATGGTTGCGAGTTTTATTTGGACGAGAATTTTCACTTGACAACCTCTTGATCATCTGGGATGAGATCTTTGCATCAGATAATAGCAAAAGGGATAAAATTGCTGATGACGACATAGACTGTGAGTTCAGGATCTTACATTCACCTCGTGGAGCATTTATCTCAGCCATTGCTGTAGCAATGTTACTGCATTTAAGATCTTCACTACTTGCAACTGAAAACCCTACAATCTGTCTCCAGAGATTATTAAACTTCCCTGAAAACATTAATATTGAAAAACTACTAGAGAAGGCTAAATCCTTTCAGGATCTTGCATTAAGTGTTGATATTTCATCCTCATCACCTTTAGTCTTAGGGTCTCAATTGATGTCTACAAGATCTATGATCCTTCCATCTGAATCTGTGTCTCCAAAAACTCCTCTGAATTCGATACCTGATAGCTACTGGGAAGAAAAGTGGAGAGTTGCCCACAAGGCTGAAGAACTTAAGCAAGATGGTATAGAAAATCAGGTTCCAACTCGGAAGAAGGGATGGACAGAAAAGGTAAAATTTAGTTTGAGAAGGACAGAATCTGACCCACCTCCATCAAGGACTAAGAGTGGCAAAAAGGAATCTAGGGCACCTGTTAGGCGCAGTTTGTTGGAAGATCTTCGTAAGGCACTTGGTTCGGAGGAAGATACAGAACAAGAACAGTGTCACGAAATCCGATGCCAGCAGGATAATCTTTCGGAAGCAGTTGAAGTAGAGAGACAAGATAGTGGCTGTAACGGTGATAACAATTACTCATCTGATGATACAAGTCCAAGTGGAAATTCTGGCTGTGAGGAAGACTCTTCTATATTTTCTGACTCAACTAGTTCTCCTAATGATGCCAATGATCATGAAATTACCTCAGAAAAAAGTAGTGTTGCATCTAATTTATCCCTTGATGAATGCCATGAAACTTCAAATACCAGTCCCAATGATTCATCCTTTCCCGTCTCTGATCCTCCTCCTGAGAGCATACCTCAGATATCAGGGTGCAATAATGATGATGCAGGGAATTCTGAATGCAATGAAACATCAGATACCAGTCACAATGATTCACCCGTTCCAATCTCGGATCCTCCAGAGAACATACCTCAAACATCAGGGTGCAATAATGATGAGGAAGGAAATTCGGCCCCACATCCTAAAGAGAGAAAACAGAATAAATTCCAGTGGTTTTGGAAGTTTGGACGGAATACTGTCGATGTTGTCTCTGAGAAAATAGGAGGTGCTGCTGATGCTACAAAATCTGCCAACAGTTGTAGCAATCAAAGTAATACACCACCACCAGCCTCATCTGCAGCTAATGGGCATTGCAGTTCTGTTAGTTGCGGAGGAGATTCTGTAGACCAGAATGTGATGGGCACTTTGAAGAATATTGGGCAGTCTATGCTTGACCATATTCAGGTGATTGAATCTGTTTTCCAACAAGACAGGGGCCAAGGAGCCTCATTGGAGAATTTATCTAAAAATGTTCTTGTTGGCAAAGGGCATGTTACTGCCATGACAGCTCTCAAGGAGCTTCGGAAAATTAGCAATATTTTGTCTGAGATGTGA 2607 0.4254 MPPAMVDLLLPSPPPPSSDSVHRRLAPENRRFGDLRGLQWRINLGVLPSSSSTSIDDLRRVTADSRRKYASLRRRLLVEPHVPKDGTNSPNLVMDNPLSQNPDSTWSRFFRNAELERMVDQDLSRLYPEHGSYFQTPGCQGMLRRILLLWCLRHPECGYRQGMHELLAPLLYVLEVDLERFSEVRKLYEDHFTDRFDCLLCQESDLSYSFDFRKSPDLMGDEIGSHGNAMKVNSIDELDPEIRTIVLLSDAYGAEGELGIVLSEKFMEHDAYCMFDALMNGAHGSVAMADFFSSSPVARSHTGLPPVIEASIALYHLLSLVDSSLHSHLSDLGVEPQYFSLRWLRVLFGREFSLDNLLIIWDEIFASDNSKRDKIADDDIDCEFRILHSPRGAFISAIAVAMLLHLRSSLLATENPTICLQRLLNFPENINIEKLLEKAKSFQDLALSVDISSSSPLVLGSQLMSTRSMILPSESVSPKTPLNSIPDSYWEEKWRVAHKAEELKQDGIENQVPTRKKGWTEKVKFSLRRTESDPPPSRTKSGKKESRAPVRRSLLEDLRKALGSEEDTEQEQCHEIRCQQDNLSEAVEVERQDSGCNGDNNYSSDDTSPSGNSGCEEDSSIFSDSTSSPNDANDHEITSEKSSVASNLSLDECHETSNTSPNDSSFPVSDPPPESIPQISGCNNDDAGNSECNETSDTSHNDSPVPISDPPENIPQTSGCNNDEEGNSAPHPKERKQNKFQWFWKFGRNTVDVVSEKIGGAADATKSANSCSNQSNTPPPASSAANGHCSSVSCGGDSVDQNVMGTLKNIGQSMLDHIQVIESVFQQDRGQGASLENLSKNVLVGKGHVTAMTALKELRKISNILSEM* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01728 868 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 34 328 IPR035969 -
Rops11g01728 868 MobiDBLite consensus disorder prediction 763 790 - -
Rops11g01728 868 MobiDBLite consensus disorder prediction 505 552 - -
Rops11g01728 868 SMART tbc_4 22 414 IPR000195 -
Rops11g01728 868 MobiDBLite consensus disorder prediction 589 735 - -
Rops11g01728 868 ProSiteProfiles TBC/rab GAP domain profile. 30 368 IPR000195 -
Rops11g01728 868 MobiDBLite consensus disorder prediction 676 725 - -
Rops11g01728 868 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 30 434 - -
Rops11g01728 868 MobiDBLite consensus disorder prediction 765 790 - -
Rops11g01728 868 FunFam TBC1 domain family member 5 307 451 - -
Rops11g01728 868 Pfam Rab-GTPase-TBC domain 267 368 IPR000195 -
Rops11g01728 868 Pfam Rab-GTPase-TBC domain 116 195 IPR000195 -
Rops11g01728 868 MobiDBLite consensus disorder prediction 594 665 - -
Rops11g01728 868 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 99 285 - -
Rops11g01728 868 Gene3D - 307 449 - -
Rops11g01728 868 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 304 443 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01728 Rops-Chr11 27265634 27271523 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01728 K18469 - gmx:100812967 1266.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01728 11 27265634 27271523 Rops11g01728 11 27265634 27271523 ECH
Rops2g05243 2 93550013 93555475 Rops11g01728 11 27265634 27271523 PCT