Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05231 ATGCGATCAGGAGCTTGTGCATTGCAGCAGACCCTCACAGCTGAGGCTGCTTCAGTTTTGAAGCACTCTCTGGGGTTGGCTCGTAGGAGGGGCCATGCACAGGTCACTCCTTTGCATGTGGCTGCTACTTTGCTGAGTTTAAGAGCTAGTTCCTTCAGAAGGGCTTGTCTTAAATCTCAGCCACACCAAATTTCACTTCCTCTTCAATGTAGAGCTCTTGAGCTTTGCTTCAATGTGGCTCTCAATAGGCTTCCAACAACACCTGGTCCTTTGATCCACTCTCAACCTTCTCTTTCCAATGCTCTCATTGCTGCATTGAAAAGAGCACAGGCACACCAGAGAAGGGGTTCCATAGAGACACAACAACAACAGCCACTTCTCGCTGTCAAAGTTGAGCTGGAACAGCTCATCATATCCATTCTAGATGACCCTAGTGTTAGCAGGGTTATGAGAGAGGCTGGGTTCTCTAGCACTGCTGTTAAGAACAACATAGAGGACTCTTCAACCCCTTCTGTTTTTCAGTGTTACAATAGTTCTGGTGGTGTGTTTTCCTCTCCTTGTTCACCTTCTACTAGTGAGAACCACAGGGAAACCATCAACTCTAGCAATTTCCGGCAGAACCATTTCTTGGCTGCTTACACTTCTGAGTTCAGGCCAGTTCACTTTTCTCCACCAAGGAAAGCCTCCGTGTATCCCATCACTGGTGCAGCTTCTTATGATAAGGATGATATCAAGCTTGTTCTGGATATCCTCTCAAGGAAGAAGAAAAAGAACACTGTGATAATTGGTGACTCAGAGTCATTAACTGAAGGCCTTGTGGGAGAGATAATGGGAAGGTTTGAAAGATCAGAGGTACCTGATGAGTTGAAGTCAACTCGTTTTATCAAATTTCAGTTTACACCAGTTTCTTCAAGGTATATGAAAAGAGATGAAGTTGAAATGAAACTCTTGGAACTGAAAAGGAAGGTGGATTCCATTGCATCAGGAAGTGGGGGTGGCATTTTTTATATTGGAGACCTGAAATGGACAGTAGATGCATCTTTCAGTGAAAAAGAGGAAGGGTCCCAAGATGGAGAATTTTCTGGTTATAACCCAGTTAATCATTTAGTTTCAGAAATAGGGAAGTTGTTCTGTGAATGTGGAACCTCAAATGCTAAGGTGTGGCTGATGACCACTGCTAGTTATCAAACATACATGAGATGTCAAATGAGGCAACCCGCTCTTGAGACACAGTGGGCTCTTCAGGCTGTTCCTGTTCCATCAGGTGGACTTGGCTTGAGTCTTCATCATGCTCCCAGTGTCCTTGATTCAAAGATGACAATCTCCCAGAACCAATCTCATATGCTGGAAACAAAGCCTTTTAGTAACAAGGAGCAGGAGGATAAACTCAATTGCTGTGAAGAATGTGCCTCTAATTATGAAAAAGAAGCTCAATTTCTCATACTAGGCCAGAAGAAGACGTTGCCTTTCTGGCTTCAGTCTCATAGCACAGAAGACCATAAAAAGGATGAATTAACCCAGTTGAAAAGAAAATGGAATAGACTATGCCACTGTCTCCATCAAAACAAACAGCCGCAGAACCACTGGAACTGGAGAAACAGTTATAATGCACCGAGTTCTATATCCTTTGCCAACAATGCTGCTAAACCCACTTATGGCTCCAATCTTATACCTCGATTCAGGAGTCAACAATCATGCACCATTGAGTTTAATTTCAGTGATGAAAGGCAAGCAACAGAGCCAGTTTTAGATTCTCTTGAGAGCATGGAAGACAAAGAAGTAAAGATTACTCTTGCTCTTGGAAATGGTGGTTCAGGTGAAACGGTGGAAAATCTAACTGATAGAACACTACAAAGAGCTCATGTTTGTAAACTGTTGCTAGAGAATGTGCCATGGCAGTCTGAGACTGTTCCTTCAATAGCAGAGGCCTTATTTGATTCCAAATCAGCAAAACAAAGTAAAATTACATGGTTATTTATGAAAGGCAATGATTCCATTGGAAAAAGAAGGTTGGCACTAGCCATTGCAGAATCAGTTTTTGGCTCAGTTGATTTGCTCCTTCACATGGACATGCTAAAAATAGAGACTTCAATAGCCCCATACTCTGAAATGCTGGTAAAAGCATTGAAAACCCATCAACAGCTTGTGGTGTTGATAGAAAATGTTGATTTTGCTGATGCCCAATTCAAGAAATTCCTCTCTGATGGATTTGAAACAGGAAAGTTTGGAAATTTGAGTAGCACAGAGGAGAATTCATGCCAAGTAATATTCATATTAACAAATGGCGGCTCCACAAGCATTGAAGAGCAGAATCAGGACTCAGTTATGAGATTGTTGTGGCAGATCAGTGAAACCAAGCCTAATTTAGAGTCACCTTGCTTGGGCCACAAGCGAAGAGCTGAACTTGATTTATTATCCAATATCAAGAGCCCCAGAATTGAAGAGAAGGAAAAGGCATTGTTAAAGAAAGACTTTTCAAGACAGTCAAGCTTTAACACCCTTGATCTGAATATGAAAGCTGATGAAGAGGATGATAAAACAGGGGAAAGTAGCCCCATTTCAAGTGATTTAACAAGAGAAACTATAGCTGATCCATTCAATCCAAATGGGTTTCTTGACTCAATTGAGAACCGGTTTGAGTTAAATACAAGTCCAGCTAGGGACAGGGAGATGCAAGAACTGTTTCTATCCAAGATCAAAAGGTCTTTTGAGGAGGTTTGTGGTAAGCAATATGTGATGAATTTTAGTGTAGATGAAAGGGTGATTGAGAATGTTTGTGTAGGGTGTGGTTCTTTTACTAACAGCTTGTTTGAGAAATGGCTAAAGGACATTTTTCAAAGCAGCTTACAAAATGTTAACTTTGGAGAGAAAGAGGGTATAGTTTTTAGACTTTGTTGGGGTGGTAAAGGAGATAGGAAATTGGATAATGGGTTCATGAGTTCTTCTCTGCCTAAGAGTATCCCAGTTAACTACTTCATAGAGTGA 2985 0.4151 MRSGACALQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSFRRACLKSQPHQISLPLQCRALELCFNVALNRLPTTPGPLIHSQPSLSNALIAALKRAQAHQRRGSIETQQQQPLLAVKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSTPSVFQCYNSSGGVFSSPCSPSTSENHRETINSSNFRQNHFLAAYTSEFRPVHFSPPRKASVYPITGAASYDKDDIKLVLDILSRKKKKNTVIIGDSESLTEGLVGEIMGRFERSEVPDELKSTRFIKFQFTPVSSRYMKRDEVEMKLLELKRKVDSIASGSGGGIFYIGDLKWTVDASFSEKEEGSQDGEFSGYNPVNHLVSEIGKLFCECGTSNAKVWLMTTASYQTYMRCQMRQPALETQWALQAVPVPSGGLGLSLHHAPSVLDSKMTISQNQSHMLETKPFSNKEQEDKLNCCEECASNYEKEAQFLILGQKKTLPFWLQSHSTEDHKKDELTQLKRKWNRLCHCLHQNKQPQNHWNWRNSYNAPSSISFANNAAKPTYGSNLIPRFRSQQSCTIEFNFSDERQATEPVLDSLESMEDKEVKITLALGNGGSGETVENLTDRTLQRAHVCKLLLENVPWQSETVPSIAEALFDSKSAKQSKITWLFMKGNDSIGKRRLALAIAESVFGSVDLLLHMDMLKIETSIAPYSEMLVKALKTHQQLVVLIENVDFADAQFKKFLSDGFETGKFGNLSSTEENSCQVIFILTNGGSTSIEEQNQDSVMRLLWQISETKPNLESPCLGHKRRAELDLLSNIKSPRIEEKEKALLKKDFSRQSSFNTLDLNMKADEEDDKTGESSPISSDLTRETIADPFNPNGFLDSIENRFELNTSPARDREMQELFLSKIKRSFEEVCGKQYVMNFSVDERVIENVCVGCGSFTNSLFEKWLKDIFQSSLQNVNFGEKEGIVFRLCWGGKGDRKLDNGFMSSSLPKSIPVNYFIE* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05231 994 Gene3D - 590 835 IPR027417 -
Rops2g05231 994 SUPERFAMILY Double Clp-N motif 12 165 IPR036628 -
Rops2g05231 994 FunFam protein SUPPRESSOR OF MAX2 1 9 170 - -
Rops2g05231 994 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 961 - -
Rops2g05231 994 Pfam Clp amino terminal domain, pathogenicity island component 131 166 IPR004176 -
Rops2g05231 994 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Rops2g05231 994 Coils Coil 456 476 - -
Rops2g05231 994 Gene3D - 233 421 IPR027417 -
Rops2g05231 994 MobiDBLite consensus disorder prediction 836 861 - -
Rops2g05231 994 Gene3D - 9 169 IPR036628 -
Rops2g05231 994 ProSiteProfiles Clp repeat (R) domain profile. 8 171 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05231 Rops-Chr2 93380070 93383952 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05231 - - gmx:100816045 1508.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05231 2 93380070 93383952 Rops2g05231 2 93380070 93383952 ECH
Rops2g05231 2 93380070 93383952 Rops11g01739 11 27597628 27601713 PCT