Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05224 ATGGAGAGGAACAAGGGCACAGAGGAAGAAAGGCTTGAAATAGTGGATTTGAGTGGCATGTCCTTGCAGTCTCTTCCCAACCCCTCTCTTAATCTAGCTACCATTTGCAAGTTGGACCTCTCCAATAACAATCTTCAGAATATTCCGGAGTCCTTAACGGCGAGACTGCTGAACGTGATGGTGTTGGACGTGCGTTCCAACCAGCTTAGGACCCTTCCGAATTCCATTGGTTGCCTCTCTAAGCTCAAGGTTTTGAATGTCTCTGGCAACCTCATCGAATACCTTCCAAAAACAATTCAGAATTGCAGATGTTTAGAAGAACTGAATGCAAACTTCAACAAGTTAAGCCAGCTACCAGACACAATAGGGTTTGAGCTCATAAACTTGAAGAAGCTATCAGTGAACTCCAACAAGCTAATCTTGCTACCACGCTCCACCTCTCACTTGACAACTCTGAAGGTTCTAGACGCTCGCTTAAACTGTCTCAGGTCTCTCCCAGATGACCTTGAAAACCTCATAAACCTCGAAACCCTTAACGTGAGTCAGAACTTCCAGTACCTTGATTCTCTCCCTTACTCCATAGGCCTCCTTTTGTCCCTTGTTGAATTGGACGTTAGCTACAACAAGATCAAGTCCTTACCTGAATCCATTGGGTGCCTCAAGAAGCTCCAGAAGCTAAGTGTGGAAGGGAACCCTCTCATTTCACCACCACAGGAAGTGATGGAGCAGGGATTGCATTCTGTGAAGGAGTACCTCTGCAACAAGATGAACACTGAACATCAAAGCCCAACTAAGAAGAAATCATGGGTTGGAAGGTTGGTGAAGTATGGGACCTTCAATGGGAACATGAGAAGTAGGTCTCGCGAAGAACGTGAAGCTTTCATCATGCCTGAGTATAGACCCATCGATGGTCTTGCTTCACCACGCTACATGGGGATGTTTTCACCTCGTCGTCTCTTCTCACCCCGTACTTTCTTCAGCAATTGA 987 0.46 MERNKGTEEERLEIVDLSGMSLQSLPNPSLNLATICKLDLSNNNLQNIPESLTARLLNVMVLDVRSNQLRTLPNSIGCLSKLKVLNVSGNLIEYLPKTIQNCRCLEELNANFNKLSQLPDTIGFELINLKKLSVNSNKLILLPRSTSHLTTLKVLDARLNCLRSLPDDLENLINLETLNVSQNFQYLDSLPYSIGLLLSLVELDVSYNKIKSLPESIGCLKKLQKLSVEGNPLISPPQEVMEQGLHSVKEYLCNKMNTEHQSPTKKKSWVGRLVKYGTFNGNMRSRSREEREAFIMPEYRPIDGLASPRYMGMFSPRRLFSPRTFFSN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05224 328 PANTHER - 126 268 - -
Rops2g05224 328 Gene3D Ribonuclease Inhibitor 1 124 IPR032675 -
Rops2g05224 328 Gene3D Ribonuclease Inhibitor 125 255 IPR032675 -
Rops2g05224 328 SMART LRR_typ_2 149 172 IPR003591 -
Rops2g05224 328 SMART LRR_typ_2 126 148 IPR003591 -
Rops2g05224 328 SMART LRR_typ_2 32 55 IPR003591 -
Rops2g05224 328 SMART LRR_typ_2 197 220 IPR003591 -
Rops2g05224 328 SMART LRR_typ_2 102 125 IPR003591 -
Rops2g05224 328 SMART LRR_typ_2 56 78 IPR003591 -
Rops2g05224 328 SMART LRR_typ_2 79 101 IPR003591 -
Rops2g05224 328 Pfam Leucine rich repeat 37 92 IPR001611 GO:0005515
Rops2g05224 328 ProSiteProfiles Leucine-rich repeat profile. 199 220 IPR001611 GO:0005515
Rops2g05224 328 ProSiteProfiles Leucine-rich repeat profile. 34 55 IPR001611 GO:0005515
Rops2g05224 328 SMART LRR_bac_2 56 75 - -
Rops2g05224 328 SMART LRR_bac_2 32 51 - -
Rops2g05224 328 SMART LRR_bac_2 126 145 - -
Rops2g05224 328 SMART LRR_bac_2 220 239 - -
Rops2g05224 328 SMART LRR_bac_2 105 121 - -
Rops2g05224 328 SMART LRR_bac_2 79 98 - -
Rops2g05224 328 SMART LRR_bac_2 197 216 - -
Rops2g05224 328 SMART LRR_bac_2 149 168 - -
Rops2g05224 328 SUPERFAMILY L domain-like 12 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05224 Rops-Chr2 93211906 93216226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05224 33 226 Receptor kinase-like Gene Family AT4G13920 32.512 3.45e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05224 - - gmx:100783239 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05224 2 93211906 93216226 Rops2g05224 2 93211906 93216226 ECH
Rops2g05224 2 93211906 93216226 Rops11g01745 11 27969145 27974168 PCT