Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01745 ATGTCTGAATTGCAACATATTCAGCAGCCAACGATGAAGATGGATACGATGAAGAAAAATAGAGAGAGGAACAAGGCCACGGAGAAAGAGAGGCTTAAAATTGTGGACTTGAGTGGCATGTCCTTGGATTCACTTCCCAAACCTTCACTTGATTTAGCTACCATTTGCAAGTTGGACCTATCTAATAACAATCTCCAGAACATTCCGGAGTCCTTAACGGCGAGATTACTGAACCTGGAGGTGTTGGACGTGCACTCCAACCAGCTCAAGTCCCTCCCCAATTCCATTGGCTGCCTCTCTAAGCTTGAGGTTTTCAATGTCTCTGGCAACTTCATTGAATCCCTCCCCAAAACCATTGAAAATTGCAGAGCCTTGGAAGAACTGAATTGCAACTTCAACAAGTTGAGCAAGCTTCCAGACACAATAGGGTTTGAGCTCATAAACCTCAAGAAGCTCGCAGTCAACTCCAACAAGCTAGTGTTCCTTCCTAGCTCCACTTCTCACCTAACAGCTCTGAAGGTTCTCGATGCACGCCTGAACTGTCTCAGGGCACTCCCTGAGGACCTTGAGAACCTCATCAACCTTGAGACCCTGAATGTGAGTCAGAACTTCCAGTACTTGGAGTCCCTACCCTATTCCATAGGGCTACTCTTGTCATTGGTTGAACTAGACGTTAGCTACAACCAGATCAAAACCTTGCCTGACTCCATTGGCTGCCTCCAGAAGCTTCAAAAACTAAGTGTGGAAGGAAATCCACTTAGTTCACCTCCAATGGAGGTGGTGGAGCAAGGACTGCATGTGGTGAAGGAGTACATGTGCCACAAGATGAACTCAGGCCATCAAATTCCAAAAAGAAGGGGTGGTGGATGGGGAAGTTGGTGA 882 0.4671 MSELQHIQQPTMKMDTMKKNRERNKATEKERLKIVDLSGMSLDSLPKPSLDLATICKLDLSNNNLQNIPESLTARLLNLEVLDVHSNQLKSLPNSIGCLSKLEVFNVSGNFIESLPKTIENCRALEELNCNFNKLSKLPDTIGFELINLKKLAVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLESLPYSIGLLLSLVELDVSYNQIKTLPDSIGCLQKLQKLSVEGNPLSSPPMEVVEQGLHVVKEYMCHKMNSGHQIPKRRGGGWGSW* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01745 293 Pfam Leucine rich repeat 57 110 IPR001611 GO:0005515
Rops11g01745 293 MobiDBLite consensus disorder prediction 1 26 - -
Rops11g01745 293 Gene3D Ribonuclease Inhibitor 145 272 IPR032675 -
Rops11g01745 293 Gene3D Ribonuclease Inhibitor 1 142 IPR032675 -
Rops11g01745 293 ProSiteProfiles Leucine-rich repeat profile. 219 240 IPR001611 GO:0005515
Rops11g01745 293 SMART LRR_typ_2 123 145 IPR003591 -
Rops11g01745 293 SMART LRR_typ_2 169 192 IPR003591 -
Rops11g01745 293 SMART LRR_typ_2 99 122 IPR003591 -
Rops11g01745 293 SMART LRR_typ_2 52 75 IPR003591 -
Rops11g01745 293 SMART LRR_typ_2 146 168 IPR003591 -
Rops11g01745 293 SMART LRR_typ_2 76 98 IPR003591 -
Rops11g01745 293 SMART LRR_typ_2 217 240 IPR003591 -
Rops11g01745 293 SUPERFAMILY L domain-like 31 258 - -
Rops11g01745 293 SMART LRR_bac_2 99 118 - -
Rops11g01745 293 SMART LRR_bac_2 146 165 - -
Rops11g01745 293 SMART LRR_bac_2 76 95 - -
Rops11g01745 293 SMART LRR_bac_2 122 141 - -
Rops11g01745 293 SMART LRR_bac_2 192 213 - -
Rops11g01745 293 SMART LRR_bac_2 169 188 - -
Rops11g01745 293 SMART LRR_bac_2 240 259 - -
Rops11g01745 293 SMART LRR_bac_2 217 236 - -
Rops11g01745 293 SMART LRR_bac_2 52 71 - -
Rops11g01745 293 ProSiteProfiles Leucine-rich repeat profile. 78 99 IPR001611 GO:0005515
Rops11g01745 293 PANTHER - 27 264 - -
Rops11g01745 293 ProSiteProfiles Leucine-rich repeat profile. 54 75 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01745 Rops-Chr11 27969145 27974168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01745 58 235 Receptor kinase-like Gene Family AT4G28490 34.759 3.95e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01745 - - gmx:100776295 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01745 11 27969145 27974168 Rops11g01745 11 27969145 27974168 ECH
Rops2g05224 2 93211906 93216226 Rops11g01745 11 27969145 27974168 PCT