Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05201 ATGGTGGTAAAGAAACCACGGATTGTGATAATTGGAGCAGGTATGGCAGGGCTCACAGCTGCCAACAAGCTCTATACTGTGGCCGGCTCCAAAGACTTGTTTGAGCTGTGTGTTGTAGAAGGTGGAAACAGGATTGGTGGCAGAATCAACACTTCAGAGTTTGGAGGTGACCTTATTGAGATGGGTGCTACTTGGATCCATGGAATTGAAGGCAGCCCAATTCACAAAATAGCTCAAAAAATCCATTCATTGGAATCTGAGCAACCTTGGGAGTTCATGGATGGGAATGGAAACTCTGATGAGCCCACCACCATTGCTGAAGGTGGCTTTGTGTTAAACCCTTCCATGGTTGACCCCATCACAAAGCTTTTCAAGAATTTGATGGATCATGCTCGGGGGAAGCTGATTGAAGATAGTACAAAAAGCGAACTTTACAATCATTATAAGCTGGCTGCTAAAGCTTCCAAGATGTCATCAACTAATGGTGACTCTGGAAACCTAAGTGTTGGCTCTTTTCTCAGACAAGGCCTTGATGATTACTTGGTTTCAGCCAAAGAGGAAGAGGAGCTCAAAGGGTATGGAAAATGGAGCAGGAAGTTACTTGATGAAGCAATCTTTGCTATGCATGAGAACACAGAGAGGAGCTATACATCGGCTGGTGACTTGTTGACTCTAGATTATGGAGCAGAAAGTGAATACCAAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAATCCTTAGCATCTGTACTACCACCTGGGTTGGTTCAGTTTGGTAGAAAAGTCACAAGAATTGAATGGCAGCCAGAGAGTTATGAACCAATGAATATGCAAAATGGCCACTCTTCTAGGCCTGTGAAACTACACTTCTGTGATGGCTCTTTTATGTATGCTGATCATGCAATTGTCACGGTTTCACTTGGAGTACTAAAAGCTGCTATTCGTGATGATTCAGGTATGTTCCATCCCCCTCTGCCTCCTTTCAAGGTCGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTGAGTCCTACAAGTGAGAACAAAGATGAACACTCCAAAGGGTTCCCGTTCCTACAAATGGTTTTTCATTCACCTCACTCTGAGTTGAGGGACAAGACAATACCATGGTGGATGAGGAGAGCAGCTGCCCTTTGTCCCATATACAACAATTCTAGTGTCCTTCTATCTTGGTTTGCCGGGGAAGAAGCACTGGTACTTGAAACACTCAAAGATGAAGAGATCATTGAAGGGGTTTCAGCAACAGTTTCAAGCTTTCTATCAGATTGGCAAAAGGGTACTGGTTCACATAAGTTCTGCAATGGGAATGTGAATTATGAGGAAAACTCTCATGGAAATGAAGTGAAATTTAGTAAAGTTTTGAAGAGCCAATGGGGAACAGATCCATTATTTTTAGGCTCATATAGTCATGTGGCAGTTGGTTCAAGTAATGATGATTTAGATACAATGGCTGAACCATTGCCAAGATATAGCAGTTGCCAATCTTCTGCATCACCACCACTTCAAATTTTGTTCGCTGGGGAAGCAACACACAGAACCCATTATTCCACAACTCATGGAGCTTATTTCAGTGGTCTTAGGGAAGCCAATAGGCTTCTTCAGCATTATCATTTCGTTGAGGTTTATAACCCCTAG 1695 0.4254 MVVKKPRIVIIGAGMAGLTAANKLYTVAGSKDLFELCVVEGGNRIGGRINTSEFGGDLIEMGATWIHGIEGSPIHKIAQKIHSLESEQPWEFMDGNGNSDEPTTIAEGGFVLNPSMVDPITKLFKNLMDHARGKLIEDSTKSELYNHYKLAAKASKMSSTNGDSGNLSVGSFLRQGLDDYLVSAKEEEELKGYGKWSRKLLDEAIFAMHENTERSYTSAGDLLTLDYGAESEYQMFPGEEITIAKGYLSIIESLASVLPPGLVQFGRKVTRIEWQPESYEPMNMQNGHSSRPVKLHFCDGSFMYADHAIVTVSLGVLKAAIRDDSGMFHPPLPPFKVEAISRLGFGVVNKLFMQLSPTSENKDEHSKGFPFLQMVFHSPHSELRDKTIPWWMRRAAALCPIYNNSSVLLSWFAGEEALVLETLKDEEIIEGVSATVSSFLSDWQKGTGSHKFCNGNVNYEENSHGNEVKFSKVLKSQWGTDPLFLGSYSHVAVGSSNDDLDTMAEPLPRYSSCQSSASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHFVEVYNP* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05201 564 Gene3D - 183 441 - -
Rops2g05201 564 SUPERFAMILY FAD/NAD(P)-binding domain 3 556 IPR036188 -
Rops2g05201 564 Pfam Flavin containing amine oxidoreductase 15 553 IPR002937 GO:0016491
Rops2g05201 564 PANTHER FLAVIN MONOAMINE OXIDASE 6 557 - -
Rops2g05201 564 SUPERFAMILY FAD-linked reductases, C-terminal domain 344 490 - -
Rops2g05201 564 Gene3D - 470 496 - -
Rops2g05201 564 FunFam Putative polyamine oxidase 5 isoform A 497 551 - -
Rops2g05201 564 Gene3D - 497 551 IPR036188 -
Rops2g05201 564 Gene3D - 231 342 IPR036188 -
Rops2g05201 564 Gene3D - 2 163 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05201 Rops-Chr2 92871270 92873275 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05201 K12259 - gmx:100809633 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05201 2 92871270 92873275 Rops2g05201 2 92871270 92873275 ECH
Rops2g05201 2 92871270 92873275 Rops11g01773 11 28424742 28427106 PCT