Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01773 ATGGTGGTGAAGAAACCACGGATTGTGATAATTGGAGCAGGAATGGCAGGTCTCACAGCTGCCAACAAGCTCTACACTGCCACTGCCTCAAAGGACTTGTTTGAGCTTTGTGTTGTAGAAGGTGGAACAAGAATTGGTGGCAGAATCAACACCTCAGAGTTTGGTGGTGACAAGATTGAGATGGGTGCTACCTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATAGCTCAAGAAACCAATTCACTGCACTCTGAACAACCTTATGAGTGCATGGATGGGAACTCAGATGAGCCTATCACCATTGCTGAAGGTGGATTCCAGCCACGCCCTTCCATTGTTGAACCTGTCACAAAGCTTTTCAAGAACCTGATGGATTACTCTCAAGGAAAACTCACTGAAGACACTGCAAAATGTGAACTTGAGAGTTACTATAAGCTGGCTGCTAAAGCTTCCAACACGTCAGCTACCACCACCAAAGGTGGCTATGGGAACCTTAGTATTGGTTCTTTTCTCAGACAAGGCCTTGATGCGTACTGGGATTCTGTTAAAGAGCAAGAGGGGCTAAAAGGGTATGGGAACTGGAGCAGGAAGTTACTTGAAGAAGCAATCTTTGCAATGCATGAGAACACTCAGAGGACTTATACATCAGCTGGTGATCTGGGGAATCTAGATTACACTGCAGAAAGCGAGTACAGAATGTTTCCAGGTGAAGAAATTACAATTGCTAAAGGGTATTTGACCATAATTGATCACTTAGCTTCTGTGTTACCACCTGGTTTAGTTCAGTTAGGTAGAAAAGTTACAAGGATTGAATGGCAGCCACAGAGAGATGAAGAGAAGAAGAATATGGAAAATGGTTGTGGTTCTAGGCCTGTGAAGCTACATTTCGGTGATGGCTCCGTTATGTCTGCTGATCATGTCATTGTCACGGTTTCACTTGGAGTGTTAAAAGCTGCTATTCGTGATGATTCAGGTATGTTCTGTCCTCCTCTTCCACCTTCCAAGGCTGAGGCAATTTCAAGGCTTGGTTTTGGTGTTGTTAACAAGTTGTTTATGCAATTGAGTCCAACACATGGAGGAAAACATGAACAGTCCAAAGGGTTCCCATTCCTGCAAATGGCTTTTCATTCGCCTCATTCTGAAATAAGGCACAAGAAAATACCATGGTGGATGAGGAGAACAGCTACCGTTTTTCCCATCTATAACAATTCTAGTGTCCTATTATCTTGGTTTGCTGGGGAAGAAGCACTAGCACTTGAATCACTCAAAGATGAAGAGATCATCAATGGGGTTTCATCAACAGTCTCAAGCTTTCTATCCCATTCTCAGTGGCAAAAGGATTCAAGTTCACATAAATTTTGCAATGGGAATGTGACTTCTGAGGAGAGATCTCACCAAAATGAAGTGAAATTCACGAAAGTTTTGAAGAGCAAATGGGGAACTGATCCATTATTTTTAGGCTCATACAGTTATGTTGCAGTAGGATCAAGTGGTGATGATTTAGATACAATGGCTGAGCCATTACCAAAAGATACAAGTTGTCATCCTCCTGCTTCATCTCCACCTCAAATTTTGTTTGCAGGGGAAGCAACTCACAGAACTCATTATTCTACAACTCATGGAGCTTACTTCAGTGGTCTTAGGGAAGCTAATAGGCTTCTTCAACATTATCATTGTGTTGGGATTTATAACAACTAG 1704 0.4261 MVVKKPRIVIIGAGMAGLTAANKLYTATASKDLFELCVVEGGTRIGGRINTSEFGGDKIEMGATWIHGIGGSPIHKIAQETNSLHSEQPYECMDGNSDEPITIAEGGFQPRPSIVEPVTKLFKNLMDYSQGKLTEDTAKCELESYYKLAAKASNTSATTTKGGYGNLSIGSFLRQGLDAYWDSVKEQEGLKGYGNWSRKLLEEAIFAMHENTQRTYTSAGDLGNLDYTAESEYRMFPGEEITIAKGYLTIIDHLASVLPPGLVQLGRKVTRIEWQPQRDEEKKNMENGCGSRPVKLHFGDGSVMSADHVIVTVSLGVLKAAIRDDSGMFCPPLPPSKAEAISRLGFGVVNKLFMQLSPTHGGKHEQSKGFPFLQMAFHSPHSEIRHKKIPWWMRRTATVFPIYNNSSVLLSWFAGEEALALESLKDEEIINGVSSTVSSFLSHSQWQKDSSSHKFCNGNVTSEERSHQNEVKFTKVLKSKWGTDPLFLGSYSYVAVGSSGDDLDTMAEPLPKDTSCHPPASSPPQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYHCVGIYNN* 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01773 567 Pfam Flavin containing amine oxidoreductase 15 556 IPR002937 GO:0016491
Rops11g01773 567 SUPERFAMILY FAD-linked reductases, C-terminal domain 345 493 - -
Rops11g01773 567 SUPERFAMILY FAD/NAD(P)-binding domain 3 559 IPR036188 -
Rops11g01773 567 FunFam Putative polyamine oxidase 5 isoform A 500 554 - -
Rops11g01773 567 Gene3D - 231 343 IPR036188 -
Rops11g01773 567 Gene3D - 500 554 IPR036188 -
Rops11g01773 567 Gene3D - 2 162 IPR036188 -
Rops11g01773 567 Gene3D - 472 499 - -
Rops11g01773 567 Gene3D - 197 445 - -
Rops11g01773 567 PANTHER FLAVIN MONOAMINE OXIDASE 6 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01773 Rops-Chr11 28424742 28427106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01773 K12259 - gmx:100783032 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01773 11 28424742 28427106 Rops11g01773 11 28424742 28427106 ECH
Rops2g05201 2 92871270 92873275 Rops11g01773 11 28424742 28427106 PCT