Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05187 ATGGCGAGGCTGCTTCGGAACACTTCCCTTCTCACACGCTCTCTATTCCTCCCTCAGGGCTTTAAATTAGGAATATCAGGCACCTCTCAGATTTTCTGCTTTTCATCTAAAGGTAGAAGGCGCTCTAAATCTGATGGAAGTGACTCGGGTGAAGAGAACATGTCTAAGAAAGATTTGGCCCTTCAACAAGCTCTTGATCAGATCACATCCACATTTGGAAAGGGATCTATCATGTGGCTTGGTCGCTCTGTCACACAAAAAAATGTACCTGTTGTGTCTACTGGTTCTTTTGCTCTTGATACAGCACTAGGAATTGGTGGACTTCCAAAGGGACGTGTTGTGGAAATATATGGTCCAGAGGCTTCTGGAAAAACAACTCTTGCTTTACATGTGATTGCTGAGGCACAGAAGCAAGGAGGCTATTGTGTCTTTGTTGATGCCGAGCATGCCCTTGATAAGACATTTGCAGAGTCTATTGGTGTGAAAACCGAGAACTTGCTTCTCTCGCAACCAGATTGTGGTGAACAAGCACTTAGTCTTGTGGATACCTTAATCCGTAGTGGTTCAGTTGATGTAATTGTTGTTGACAGTGTGGCTGCTCTTGTTCCTAAAGGTGAGCTTGATGGTGAGATGGGTGATGCTCACATGGCAATGCAGGCTAGGTTGATGAGCCAGGCGCTTCGTAAATTGAGCCACTCCTTGTCACTTTCTCAAAGTATATTGATTTTTATAAACCAGGTGAGGTCAAAGCTTTCTACTTTTGGGGGATTTGGTGGGCCCACTGAAGTTACTTGTGGTGGTAATGCCTTGAAATTCTATGCATCTGTGCGGCTAAATATCAAGAGAATAGGGTTTGTCAAGAAGGGTGAAGAGATTTTAGGAAGCCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCTTGCCCCTCCATTTAAAACTGCTGAGTTTGAGCTTCAATTTGGCAAGGGTATATGTAGAGAAGCAGAGATTATTAAGTACAGCGTAAAATACAAACTCATCTTGAAGGCTGGTGCGATGTATTACTATAAAGAACAGAATTTCCGCGGTGTGGATGCTCTCAAGAGTTTCCTAGCTGAGAATCCTAGTGCATTGGAAGAACTTGAAATGAAGGTCAGGGAGAAGCTTCTCAATGCTGAGACAGAAAAGGTGCCAGAGGCAGATGGGTTTAGTGGAGATGTATCAGAAGAAATTGCAACCCTTGATTCTACTGATGAAGAAGCTGCAGTTGTAGCAGAAGCATGA 1260 0.4373 MARLLRNTSLLTRSLFLPQGFKLGISGTSQIFCFSSKGRRRSKSDGSDSGEENMSKKDLALQQALDQITSTFGKGSIMWLGRSVTQKNVPVVSTGSFALDTALGIGGLPKGRVVEIYGPEASGKTTLALHVIAEAQKQGGYCVFVDAEHALDKTFAESIGVKTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLSHSLSLSQSILIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYASVRLNIKRIGFVKKGEEILGSQVLVKVVKNKLAPPFKTAEFELQFGKGICREAEIIKYSVKYKLILKAGAMYYYKEQNFRGVDALKSFLAENPSALEELEMKVREKLLNAETEKVPEADGFSGDVSEEIATLDSTDEEAAVVAEA* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05187 419 SUPERFAMILY RecA protein, C-terminal domain 325 380 IPR023400 -
Rops2g05187 419 ProSiteProfiles RecA family profile 1. 88 247 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Rops2g05187 419 ProSitePatterns recA signature. 269 277 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Rops2g05187 419 SMART AAA_5 110 284 IPR003593 GO:0016887
Rops2g05187 419 Pfam recA bacterial DNA recombination protein 60 323 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PRINTS RecA protein signature 352 369 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PRINTS RecA protein signature 299 328 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PRINTS RecA protein signature 146 175 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PRINTS RecA protein signature 218 247 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PRINTS RecA protein signature 266 294 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PRINTS RecA protein signature 180 209 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 Hamap Protein RecA [recA]. 57 384 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 323 IPR027417 -
Rops2g05187 419 CDD RecA 88 325 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 ProSiteProfiles RecA family profile 2. 257 328 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Rops2g05187 419 Gene3D - 86 388 IPR027417 -
Rops2g05187 419 FunFam Recombinase RecA 86 385 - -
Rops2g05187 419 NCBIfam recombinase RecA 57 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
Rops2g05187 419 PANTHER RECA 34 389 IPR013765 GO:0003697|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05187 Rops-Chr2 92618069 92625002 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05187 K03553 - gmx:100781271 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05187 2 92618069 92625002 Rops2g05187 2 92618069 92625002 ECH
Rops2g05187 2 92618069 92625002 Rops11g01784 11 28681750 28687767 PCT