Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05180 ATGGCGATTTCCGAAGACCCTGACACTGCGTCCGTTCAAACCGGCTTAGGTCTCCACCAGTCCTCCGTGCGCCGCCGGATGACCGCCACCTCCGACGGTGGTTTGTTCAATTCTGTTGACGGTGATAGTTCGACTGAAGAGTTGGTCAAGGATTCTGGTTCCGACGACTCCATAAACAGCGAACAACAACACAATTCAGAACAAAACCAAGTTCGTGATACCTCCGCCGTCAAATTCGCCTACCGTCCTTCCGTTCCCGCTCATCGCAAAGTGAAAGAAAGCCCTCTCAGCTCCGACAACATTTTCCGTCAGCTGCAGAGTCATGCGGGTCTCTTCAACCTATGTATAGTGGTGCTTGTTGCAGTAAATAGCAGACTTATCATTGAGAATTTAATGAAGTACGGTTGGTTGATTGAGTCTGGCTTTTGGTTTAGTTCAAAATCGTTGAGAGATTGGCCCCTCTTCATGTGTTGTCTTTCTCTTGCAATATTTCCTTTTGCTGCCTTTATAGTGGAAAAGTTGGCAGAACGAAATTATATTTCTGAACCAGTTGTTGTTCTACTTCATGTAATCATCACAACAGCTGCAGTTATCTATCCAGTTTTAGTAATCCTCAGGTGTGATTCTGCTTTTCTATCAGGCGTCACATTAATGCTATTGGCTTGCATTGTATGGTTAAAATTGGTGTCTTATGCACATACAAACTACGATATGAGAGCACTTACGAAATCAATTGAAAAGGGAGAAGCACTGCCCAATACTCTGAATATGGACTATCCTTATGAAGTGAGCTTCAAGAGCTTGGCGTACTTTATGGTTGCTCCTACATTATGTTACCAGCCAAGATATCCTCGCACCCCTTATATTCGAAAGGGTTGGATTTTTCGTCAACTTGTGAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATTAATCCTATTGTGCAAAATTCACAGCATCCTTTGAAGGGGAACCTTCTCTATGCCATCGAAAGAATTCTGAAGCTGTCTGTTCCAAATTTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCACCTTTGGTTAAATATACTTGCAGAGCTTCTTCGATTTGGTGATCGTGAATTCTACAAGGATTGGTGGAATGCCAAAACTGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTTCACAAATGGATGATCCGCCACCTATATTTTCCATGTTTAAGGAATGGGATACCCAAGGGTGTTGCTGTTGTAATTGCCTTTCTGGTTTCTGCTTTGTTCCATGAGTTGTGCATTGCCGTTCCTGGCCACATGTTCAAATGGTGGGCTTTTGGTGGAATTATGTTACAGGTTCCTTTGGTCTTGATAACTAATTATCTGCAAAATAAATTCAGAAACTCAATGGTCGGAAATATGATTTTTTGGTTCATATTCAGTATTCTTGGTCAACCAATGTGTGTACTACTATACTACCATGACTTGATGAATAGGAGAAGAAAACTTGACCAAAGCTAG 1521 0.4162 MAISEDPDTASVQTGLGLHQSSVRRRMTATSDGGLFNSVDGDSSTEELVKDSGSDDSINSEQQHNSEQNQVRDTSAVKFAYRPSVPAHRKVKESPLSSDNIFRQLQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIESGFWFSSKSLRDWPLFMCCLSLAIFPFAAFIVEKLAERNYISEPVVVLLHVIITTAAVIYPVLVILRCDSAFLSGVTLMLLACIVWLKLVSYAHTNYDMRALTKSIEKGEALPNTLNMDYPYEVSFKSLAYFMVAPTLCYQPRYPRTPYIRKGWIFRQLVKLIIFTGVMGFIIEQYINPIVQNSQHPLKGNLLYAIERILKLSVPNLYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWMIRHLYFPCLRNGIPKGVAVVIAFLVSALFHELCIAVPGHMFKWWAFGGIMLQVPLVLITNYLQNKFRNSMVGNMIFWFIFSILGQPMCVLLYYHDLMNRRRKLDQS* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05180 506 PANTHER STEROL O-ACYLTRANSFERASE 52 500 IPR014371 GO:0008374
Rops2g05180 506 MobiDBLite consensus disorder prediction 7 43 - -
Rops2g05180 506 MobiDBLite consensus disorder prediction 55 71 - -
Rops2g05180 506 PIRSF Oat_dag 16 505 IPR027251 GO:0004144|GO:0019432
Rops2g05180 506 MobiDBLite consensus disorder prediction 1 71 - -
Rops2g05180 506 Pfam MBOAT, membrane-bound O-acyltransferase family 267 490 IPR004299 -
Rops2g05180 506 PIRSF Oat_ACAT_DAG_ARE 7 504 IPR014371 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05180 Rops-Chr2 92550548 92560202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g05180 32 504 Lipid Metabolism Gene Families AT2G19450 67.611 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05180 K11155 - gmx:548005 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05180 2 92550548 92560202 Rops2g05180 2 92550548 92560202 ECH
Rops2g05180 2 92550548 92560202 Rops11g01792 11 28810300 28821433 PCT