Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01792 ATGGCTATCTCCGACGTGCCAGAAAGTGTTGGCACCACCGCCACAACAGCCACCTTCCAAACCGAATCAGATCTCAAACGGTCTTCTCTACGGCACAGGTCCAGCGGCGCCACCTCTGGCGGCGGCGGCTTGTTCAACGCCGAGATTGCAACTGAAGATGCGATGAGAGAATCTGCTTCCGACGACTCCTTGAACTGCAAGAGCAGCGAGGAGGATAAAGATCACAAAACGGATCATGCAGCCGCTGATAATGCGATCCTTAAAGATCGAAATTCAGGCGCCGATTTCAAATTCGCTTACCGTCCCTCCATTCCTGTTCACCGGAAAATCAAGGAAAGCCCGCTCAGCTCCGATAACATTTTCAGACAGAGTCACGCTGGACTGTTCAATCTCTGTATAGTAGTGCTTGTTGCTGTGAATAGCAGGCTTATCATTGAGAATTTAATGAAGTACGGTTGGTTGATTAAGTCTGGCTTTTGGTTTAGTTCTAAATCGTTGAGAGATTGGCCCCTCTTTATGTGCTGTCTTAGTCTTGCAATATTTCCACTTGCTGCCTTTATAGTGGAAAAGTTGGCACACCGAAAGTGTATTTCTGAACCAGTTGTTGTCCTACTTCATCTAATCATCACGACCATTGGAGTCTTCTATCCAGTTTTAGTAATCCTCAGGTGTGATTCTGCTTTTTTATCAGGTGTCACATTGATGCTATTTACTTGCATTGTGTGGTTGAAATTGGTGTCATATGCACATACAAACTATGACATGAGAGCGCTTACTGTTTCAAATGAAAAGGGAGAAACATTGCCCAATAATTTGAATATGGAGTACCCATACAATGTGAGCTTCGAGAGTTTGGTATACTTCATGGTTGCTCCTACATTATGCTACCAGCCAAGCTATCCTCGCACACCTTCGGTTCGAATGGGTTGGGTGTTTCGTCAACTTGTCAAGCTGATAATATTTACAGGAGTTATGGGATTTATAATAGAACAATATATGAATCCTATTGTCCGAAATTCACAACATCCTTTCAAGGGAAACCTTCTATATGCCGTTGAAAGAGTTCTGAAGCTTTCTGTTCCAAATGTATATGTGTGGCTCTGCATGTTCTACTGCTTTTTCCATCTTTGGTTAAATATACTTGCAGAGCTTCTTCGATTTGGTGATCGTGAGTTCTACAAAGATTGGTGGAATGCTAAAACCGTTGAAGAGTATTGGAGGATGTGGAATATGCCTGTGCACAAATGGATGGTTCGCCACGTATATTTTCCATGCATAAGGAATGGTATTCCCAAGGGAGCTGCTGCATTAATTGCCTTCCTGATTTCTGCTATGTTCCATGAGTTATGCATTGCTGTTCCTTGCCATATGTTGAAGTTGTGGGCTTTTTTCGGAATTATGTTTCAGGTTCCTTTGGTCTTGATCACTAATTACCTGCAAAATAAATACAGAAACTCAATGGTTGGAAATATGATTTTTTGGTTCATATTTTGTATACTTGGCCAACCAATGTCCGTACTACTATACTACCATGACCTGATGAATAGGAAAGGGGAAATTGACTGA 1566 0.4234 MAISDVPESVGTTATTATFQTESDLKRSSLRHRSSGATSGGGGLFNAEIATEDAMRESASDDSLNCKSSEEDKDHKTDHAAADNAILKDRNSGADFKFAYRPSIPVHRKIKESPLSSDNIFRQSHAGLFNLCIVVLVAVNSRLIIENLMKYGWLIKSGFWFSSKSLRDWPLFMCCLSLAIFPLAAFIVEKLAHRKCISEPVVVLLHLIITTIGVFYPVLVILRCDSAFLSGVTLMLFTCIVWLKLVSYAHTNYDMRALTVSNEKGETLPNNLNMEYPYNVSFESLVYFMVAPTLCYQPSYPRTPSVRMGWVFRQLVKLIIFTGVMGFIIEQYMNPIVRNSQHPFKGNLLYAVERVLKLSVPNVYVWLCMFYCFFHLWLNILAELLRFGDREFYKDWWNAKTVEEYWRMWNMPVHKWMVRHVYFPCIRNGIPKGAAALIAFLISAMFHELCIAVPCHMLKLWAFFGIMFQVPLVLITNYLQNKYRNSMVGNMIFWFIFCILGQPMSVLLYYHDLMNRKGEID* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01792 521 Pfam MBOAT, membrane-bound O-acyltransferase family 241 504 IPR004299 -
Rops11g01792 521 PIRSF Oat_ACAT_DAG_ARE 8 521 IPR014371 GO:0008374
Rops11g01792 521 MobiDBLite consensus disorder prediction 1 84 - -
Rops11g01792 521 PANTHER STEROL O-ACYLTRANSFERASE 56 517 IPR014371 GO:0008374
Rops11g01792 521 PIRSF Oat_dag 4 521 IPR027251 GO:0004144|GO:0019432
Rops11g01792 521 MobiDBLite consensus disorder prediction 8 24 - -
Rops11g01792 521 MobiDBLite consensus disorder prediction 54 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01792 Rops-Chr11 28810300 28821433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g01792 94 520 Lipid Metabolism Gene Families AT2G19450 76.347 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01792 K11155 - gmx:547982 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01792 11 28810300 28821433 Rops11g01792 11 28810300 28821433 ECH
Rops2g05180 2 92550548 92560202 Rops11g01792 11 28810300 28821433 PCT