Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05163 ATGTCGTGGAAAGTTGAAGGTGGTAGAAAAAGTTGTGAAGAGCAGAACAAGTTGTTCTTAAAAGATGTTGAAAGTATAAGCAAAACTCTGTACCTGGAAAAAAGCTCTTCAAGGAGTTCAGCATCATCGAAATCCACAGAGAAACCCTGCTTACCTGATTCAAAATCAAAGCCTAAAGCCAGTAAAGAAGATAATTTACGCAAGGATAAGAAGTCCATATGGAATTGGAAGCCATTGAAGGCCCTCTCCCTTAGGCAAAATAGGCGGTTTGATTGTAGTTTTTCTCTCCAAGTCCATTTGATTGAAGGGTTGCCTTCTAGTTTCAATGATTCCAGCCTTTGTGTGCACTGGAAGAGGAGGGATGAGCATTTGGTGACCCCTCCAGCCAAGGTGATTCAAGGTTTGGCTGAGTTTCAAGATATCTTGACTCTCACTTGCTCAATCCAAGGAAGTAGGAGTAGACCCCACAATTCTGCAAAATATGAAGCTAAGCATTTTTTGCTCTATGCTTCTGTGCTCGGTGCCCCAGAACTTGATTTAGGGAAGCACCGGGTGGATCTCACAAGGTTGCTTCCTCTCTCATTGGAAGAGCTTGAAGAGAAGAAGAGCTCAGGGAAGTGGACTACAAGTTTTAGATTATCAGGAAAGGCTAAGGGTGCAGTATTGAATGTCAGTTTTGGGTATGTGGTGGTTGGTGATAACACTAGTGCTGCCAGAGATAACCGTAGTGCTCCTAAGGTATTGACTTCAAGGCAAAATAGTCTGCCTTTGATGGAATCAGATATAAAACCCAGTCAGTCTGACAGGAGAGTTAGCTGTACCGGAAGTTTTTCAAGCTTTACCAGTCAGAATTCACCTCAAAATATAGATGAGGTAAAGGATCTTCATGAGGTATTGCCATTATCAAAATCAGCACTCGCCAGCTCAATAGACATCTTATATAAGAAATTTGATGGAGAAAAGGTATGGAGTCCTCTGCACAACAAACCTGAACTTGATGAATTTAAAGAAAATCTTGAGCCGATCAAACTGGATACCTTTTGTTCATCTAATACTGAAAAAGAAAAGCCAGAAAAGCATCCAGGTAATGAAGGAAAAACATGTAGTCCAGTGCATGACAAACCTGAACTTGCTGTGTTTCAAGAAAACCTGGAGACAGTTAAGCCAGATGGTTATCCTTTACCTGGTTCTGGAAAAGAAAATCCTGAACAGTGTGAAGGCAATGGATTTTCTATTGTTGATCAGGGCATCGAATTTTCATCAAATGAACATGTTAAATTGGAGGAATCCATTGTAAAAGCTATTTTTGATGCTCATACAGTTGACAGTACCCCTACTCCTGATACTGCTGGTACACAAGCATCTTCTCAAGATAGTGTTAAACAGGATTCCCTGGATGAACTGCATGATAGTACCATGGAATGTTCCGTGATACATGAATTTTCTAACAAAAAGGATGACATATGCACGAAAGAACTTCTCCTGCAAGAACTAGAATTGGCTTTAAAAAGTGTCTCTGAGTTGGAGACAGTGGCACTGGAATCTCCTAAAGTTTTGGAAGCCAAATCTGAATCTAAGATGAGAAAGTCACATAGCTTGGATGATGTTACTGAATCAGTTGCCAGTGAATTTTTAAGCATGCTAGGTATAGACCACAGTCCAATTGACTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGAGAGCGCCTTTTAAGACAATTTGAGAAGGATGTTCTGACTGAGGGCTTCTCTTTATTTGATTTTGACATGGGCAAGGACGATGAAGAAGATGGTGGCTATGATTCTTCTTTTGGATCTGAGCAGTGGAAGTTCTCTGCAGGTATTAAGTCACCATCCTTGTTGCAAGATCTACAGGAAGGGCATCTAATTGAGTCTGAGGATGTGAAGAGCAAACAGAAGGGCCAGATGTTAGAAGACTTGGAAACAGAAGCCTTAATGCGTGAATGGGGTTTAAATGAGAAGGCTTTTCAGCATTCTCCCCCGAAAGACAATGTTGGTTTTGGAAGTCCAATAGATCTACCACCTGAAGAGCCTCTAATATTACCTCCTCTGGCGGAGGCGTTAGGTCCTTGTCTTCAGACAAAAGATGGGGGGTTTCTACGGTCTATGAATCCCTCACTTTTTAGGAATGCTAGAAGTGGTGGGAACTTAATCATGCAGGTTTCCAACCCTGTTGTGATGCCTGCAGAAATGGGTTCAGGGATAATGGAGATTTTGCAGTGTTTGGCTTCAGTCGGAATTGAAAAGCTTTCGATGCAGGCAAACAAATTAATGCCTCTGGAAGATATCACCGGCAAGACAATGCAACAAATATCATGGGAAGCTATGCCAGTCTTAGAGGGAACAGACAGGCAATGTCATTTGCAGCATGATTTGGTAACAGGGCAAGATTCCAATTCCGTGCAAAGGGGCTTAAAAGTAACATCTTCTGGACTAAAGTCTGATAAGTTTAGTTCAAGTTCAGTTGGCAACCAGAGAGGCTCAGGGTTTGCTTCACTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAATGGAGGGTTTGAAAATACAATCTGGGATGTCCGAGGATGCATCATCAAACATCATTACACAATCCTTTGGAGATATTTCAGCTCTCCAAGGCAAGGGGGTTAATATTAGTGGGTCTCTTGGCCATGATGAAGCTGCTGCTTTGCAGTTGTTGGATATAAAAGACAGCGACGATGGTGTTGATGGGATAATGGGTTTATCATTAACTCTTGATGAATGGATGAGGCTGGATTCTGGTGAGATTGATGATATAGATAATATCAGTGAGCATACTTCCAAACTTCTTGCTGCCCATCATGCTAACTCTTCTGACTTAATTTGTGGGAGTTCAAAGGGAGACAAGAAACGAGGAAAAGGCCAAGACAGAAAATGTGGTCTGCTGGGAAACAATTTCACAGTTGCATTAAAGGTGCAACTTCGTGATCCTCTGAGAAATTATGAGCCTGTTGGAACACCAATGCTTGCTCTCATACAAGTTGAGAGAGTCATTGTCCCACCAAAGCAAAAAATTTACAGGAGTGTGTACGAAGTCGGGAACAATAATGACGAGGATGATGAATTTGAAATAGTAGCCAAGGTGGAAATGAAGGACACCAACGAGGATAAAAGTTCTAAAGAGGAGGGCATTCCTCAGTTCAGAATTACGGAAGTCCATGTTGCAGGTCTGAAGATCGAGCCTCACAAAAAGAAGCTTTGGGGCACTTCAAGTCAGCAACAATCTGGTTCCCGCTGGTTGCTTGCTAATGGAATGGGTAAGAGCAATAAGAATCCATTAATGAAGTCAAAGGCTATATCTAAATCTAGTGCTCCGGTCACCACAAAGGTGCAACCTGGTGACACGTTGTGGAGCATATCATCTCGTATTTATGGAACTGGAGCAAAATGGAAGGAAGCAATTGGTATAACATCGTAA 3477 0.4193 MSWKVEGGRKSCEEQNKLFLKDVESISKTLYLEKSSSRSSASSKSTEKPCLPDSKSKPKASKEDNLRKDKKSIWNWKPLKALSLRQNRRFDCSFSLQVHLIEGLPSSFNDSSLCVHWKRRDEHLVTPPAKVIQGLAEFQDILTLTCSIQGSRSRPHNSAKYEAKHFLLYASVLGAPELDLGKHRVDLTRLLPLSLEELEEKKSSGKWTTSFRLSGKAKGAVLNVSFGYVVVGDNTSAARDNRSAPKVLTSRQNSLPLMESDIKPSQSDRRVSCTGSFSSFTSQNSPQNIDEVKDLHEVLPLSKSALASSIDILYKKFDGEKVWSPLHNKPELDEFKENLEPIKLDTFCSSNTEKEKPEKHPGNEGKTCSPVHDKPELAVFQENLETVKPDGYPLPGSGKENPEQCEGNGFSIVDQGIEFSSNEHVKLEESIVKAIFDAHTVDSTPTPDTAGTQASSQDSVKQDSLDELHDSTMECSVIHEFSNKKDDICTKELLLQELELALKSVSELETVALESPKVLEAKSESKMRKSHSLDDVTESVASEFLSMLGIDHSPIDLSSESEPESPRERLLRQFEKDVLTEGFSLFDFDMGKDDEEDGGYDSSFGSEQWKFSAGIKSPSLLQDLQEGHLIESEDVKSKQKGQMLEDLETEALMREWGLNEKAFQHSPPKDNVGFGSPIDLPPEEPLILPPLAEALGPCLQTKDGGFLRSMNPSLFRNARSGGNLIMQVSNPVVMPAEMGSGIMEILQCLASVGIEKLSMQANKLMPLEDITGKTMQQISWEAMPVLEGTDRQCHLQHDLVTGQDSNSVQRGLKVTSSGLKSDKFSSSSVGNQRGSGFASLEDLAPLAMDKIEALSMEGLKIQSGMSEDASSNIITQSFGDISALQGKGVNISGSLGHDEAAALQLLDIKDSDDGVDGIMGLSLTLDEWMRLDSGEIDDIDNISEHTSKLLAAHHANSSDLICGSSKGDKKRGKGQDRKCGLLGNNFTVALKVQLRDPLRNYEPVGTPMLALIQVERVIVPPKQKIYRSVYEVGNNNDEDDEFEIVAKVEMKDTNEDKSSKEEGIPQFRITEVHVAGLKIEPHKKKLWGTSSQQQSGSRWLLANGMGKSNKNPLMKSKAISKSSAPVTTKVQPGDTLWSISSRIYGTGAKWKEAIGITS* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05163 1158 CDD LysM 1129 1146 IPR018392 -
Rops2g05163 1158 ProSiteProfiles C2 NT-type domain profile. 82 230 IPR019448 -
Rops2g05163 1158 ProSiteProfiles LysM domain profile. 1126 1158 IPR018392 -
Rops2g05163 1158 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1153 IPR039614 -
Rops2g05163 1158 MobiDBLite consensus disorder prediction 32 49 - -
Rops2g05163 1158 MobiDBLite consensus disorder prediction 443 462 - -
Rops2g05163 1158 MobiDBLite consensus disorder prediction 50 67 - -
Rops2g05163 1158 MobiDBLite consensus disorder prediction 443 461 - -
Rops2g05163 1158 MobiDBLite consensus disorder prediction 32 67 - -
Rops2g05163 1158 MobiDBLite consensus disorder prediction 350 371 - -
Rops2g05163 1158 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 87 231 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05163 Rops-Chr2 92326749 92331241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05163 - - gmx:100815106 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05163 2 92326749 92331241 Rops2g05163 2 92326749 92331241 ECH
Rops2g05163 2 92326749 92331241 Rops11g01810 11 29107596 29112018 PCT