Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g05048 ATGTATGCGGCGGAGCTTCTAGGCATCTTCGCCGTGCACGGCGGCGATGCTTCATTGGCAGTGTCCGCCACCGCTGCCTCCACCAATAAGTGCTTCAAAAACGCAGCTTTCACGACACTCACATCCCATAACGCCGCGAATGTTAGGTTGGCAACGCTTCGTCGTTGCACCGTTGACTCCAAGTCCGTCGGCGGTGAAGTTTTCTCGGTGACATCGTCGAACAAGTGTGACGTGGACTACCTTGGTGAGAGCACCAAAGGTGATTTGAACGTCAAGTTGGAGCATCTTGAGACTTTTGGAATTGATGGTCATGCTGCATTTGATGGTCCAATTGAGGAAGTGGCCAGAACAGAGGCCAGAGAAGCAGAAGGTTTGCTAAAAGACTTGGGTATTCCGAGTCCTTCTTCATCCAGAAATTCACCTCGTGGAATATTCTGCAGCCGTACATTGAATCTGCGGTCAATTAGTGCCATTGGATATGACATGGACTATACTTTGATCCATTATAATGTGATGGCTTGGGAAGGGCGGGCTTATGACTACTGTATGGAAAACCTTAGGAACATGGGTTTCCCTGTTGATGGACTTGCATTTGATCCTGACCTGGTAATTAGAGGCCTTGTCATAGACAAAGAGAAAGGCAATTTGGTTAAAGCTGATCGATTTGGTTATGTAAAAAGAGCCATGCATGGCACCAAAATGTTATCTACTCGAGCTGTTAGTGAGATGTATGGGAGAGAACTGGTGGACCTAAAGGAGAGTCGATGGGAGTTTCTCAATACACTGTTCTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGGACTATACCATCAGATCTTGCCCCCCTTGATTATAAAGGGCTTTATAAGGCTGTTGGAAAAGCTCTCTTCTGGGCACATGTAGAAGGCCGTCTTAAGAGTGAGATCATGTCAAAGCCTGAACAGTTTGTGGAGCCTGATCCTGAATTGCCTTTGGCACTTTTGGATCAGAAGGAGGCTGGCAAAAAGCTTCTGCTTATTACCAACTCGGATTATCATTACACAGACAAAATGATGCAGCATTCTTTTAATAGATTCCTCCCCAATGATATGGGTTGGCGAGATCTATTTGACATTGTAATTGTGTCAGCAAGAAAACCAGAGTTCTTCCAAACGTCACACCCCATGTATGAAGTGGTGACAGGCGAGGGTCTGATGCGTCCATGCTTCAAGGCTCAAACTGGTGGTTTGTACTCAGGGGGTAGTGCACAAATGGTTGAAAATTCTCTAAATATCCATGGTGATGAGATATTGTATGTTGGTGACCATATTTACACCGATGTCAGTCAATCCAAAGTCCATTTGCGATGGCGAACGGCATTGATTTGTCGAGAATTGGAACAAGAGTACAATGCCTTGATTCGTAGCCGGAGTTATAGAGAATCATTGGTGGAGCTTATAAATCAAAAGGAAGTTGTAGGGGATCTCTTCAACCAACTTCGGCTGGCTCTGCAGAGGCGAAGCAAAGACCGCCCTGCACAAACCCTTGCAGCAACTAACATGAATGATGACGACCTCACTGAAAGCATGCAAAAACTACTTATTGTTATGCAAAGACTAGATGAGAAAATTGCTCCAATGCTAGAGACAGATGGGGAGCTCTTCAATTCAAGGTGGGGCTTTCTATCTCGTGCTGGACTGTGGGATAAAAGCCACTTGATGAGACAAATTGAGAAATATGCTGATATTTATACATCTAGGGTGTCAAATTTTTTGTATTATACACCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCGCATGACTCATACACACACTATTGTTCACAACTCAATAATGAGTTTTCCTCCTAG 1878 0.4494 MYAAELLGIFAVHGGDASLAVSATAASTNKCFKNAAFTTLTSHNAANVRLATLRRCTVDSKSVGGEVFSVTSSNKCDVDYLGESTKGDLNVKLEHLETFGIDGHAAFDGPIEEVARTEAREAEGLLKDLGIPSPSSSRNSPRGIFCSRTLNLRSISAIGYDMDYTLIHYNVMAWEGRAYDYCMENLRNMGFPVDGLAFDPDLVIRGLVIDKEKGNLVKADRFGYVKRAMHGTKMLSTRAVSEMYGRELVDLKESRWEFLNTLFSVSEAVAYMQMVDRLDDGTIPSDLAPLDYKGLYKAVGKALFWAHVEGRLKSEIMSKPEQFVEPDPELPLALLDQKEAGKKLLLITNSDYHYTDKMMQHSFNRFLPNDMGWRDLFDIVIVSARKPEFFQTSHPMYEVVTGEGLMRPCFKAQTGGLYSGGSAQMVENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEQEYNALIRSRSYRESLVELINQKEVVGDLFNQLRLALQRRSKDRPAQTLAATNMNDDDLTESMQKLLIVMQRLDEKIAPMLETDGELFNSRWGFLSRAGLWDKSHLMRQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDSYTHYCSQLNNEFSS* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g05048 625 SUPERFAMILY HAD-like 141 612 IPR036412 -
Rops2g05048 625 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 135 610 IPR008380 -
Rops2g05048 625 Pfam 5' nucleotidase family 144 611 IPR008380 -
Rops2g05048 625 CDD HAD_cN-II 145 469 - -
Rops2g05048 625 Gene3D - 306 493 IPR023214 -
Rops2g05048 625 NCBIfam HAD-IG family 5'-nucleotidase 144 483 IPR008380 -
Rops2g05048 625 FunFam Haloacid dehalogenase hydrolase 302 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g05048 Rops-Chr2 90553914 90562104 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g05048 - - gmx:100800826 1091.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05048 2 90553914 90562104 Rops2g05048 2 90553914 90562104 ECH
Rops2g05048 2 90553914 90562104 Rops11g01932 11 31172901 31182107 PCT