Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01932 ATGGTGTCAGCCCCCACCAACAGACCCACTTCCCTTAAAGCTTTCTTCAATGTTGAACCCGCAAGAAAAGCTTCAACGGTTTGTTTCTGTTCCTCCGTGGATCCCAAGCCACTCAACGACGCCGTTTTCTCAGTGACACCTTCCAACAAGAGCGACGTGGACTACCTTGGGGAGAGCACCAAGGGAGACTTGAACGTTAAGTTGGATCATCTTGAGGCTTTTGGAATTGATAGTCAAGCTGCATTAGAAGGTCCAATTGAGGAGGTAGCTAGAACAAAGGCTAGAGAAGCTGAAGATTTACTGAAAGACTTGGATATTCCGGTGCAGTATACCTACTCCTTTTGCTTAGTTGCTCCTTTTCTAGTTGCTCAAATTTGGCTGGAAAGAAGCTGTGGTGTCCTGTGTTCTATGCTATTAAGTCCTTCTTCATCAAAGAATTCACCTCGTGGAATATTCTGCACCCGTACATTGAATTTGCGGTCAATTAGCGTCATTGGATATGACATGGACTATACCTTGATGCATTATAATGTGATGGCTTGGGAAGGGCGGGCTTATGACTACTGTATGGAAAACATGAAGAATATGGGTTTCCCTGTTGATGGACTTGCATTTGATCCGGACCTGGTTATTAGAGGCCTTGTCATAGACAAAGAGAGGGGCAACTTGGTTAAAGCTGATCGTTTTGGTTATGTAAAAAGAGCCATGCATGGAACCAAAATGTTATCTACTCGTGCTGTGAGTGAGATGTATGGGAGAGAACTGGTGGACCTACGGAAGGAAAGTCGATGGGAGTTTCTCAACACACTATTCTCTGTGTCTGAAGCTGTGGCCTACATGCAGATGGTTGACAGATTGGATGATGGGGCTATACCATCAGATCTTGGTTCCTTTGATTATAAAGGGCTTTACAAGGCTGTTGGAAAAGCTCTCTTCAGGGCACATGTTGAAGGTCGCCTCAAGAGTGAGATTATTTCCAACCCTGAACAGTTTGTGGAGCCTGATTCAGAATTGCCCTTGGCACTTTTGGATCAAAAGGAGGCTGGCAAAAAACTTCTGCTTATTACCAACTCAGATTATCATTATACCGACAAAATGATGCACCATTCATTCAATAGATTCCTTCCCAATGATATGGGTTGGCGAGATTTATTTGACATCGTAATTGTCTCAGCACAGAAACCAGAATTCTTCCAAACTTCACACCCCATGTATGAAGTGGTGACAGGCGAGGGTCTGATGCGTCCATGCTTCAAGGCTGAAACTGGTGGGTTGTACTCAGGGGGAAGTGCACAGATGATTGAAAATTCCCTAAATATACATGGAGATGAGATATTGTATGTTGGTGACCATATTTACACTGATGTCAGTCAGTCCAAAGTCCATTTGCGATGGCGAACAGCATTGATCTGTCGGGAACTGGAAGAAGAGTACAGTGCCCTAATCCATAACCAGGGTCATAGACAAGCATTGGTGGAACTAATAAATCAAAAGGAAGCTGTGGGTGATATCTTTAACCAACTACGGCTGGCTCTGCAGAGGCGAAGTAAAGGGCGTCCTGCTCAAACCCTTGCTGCAACTACAATGGAGGACGAAAAACTTACTGAAAGCATGCAAAAGCTACTTATTGTTATGCAAAGACTAGATGAGAAAATTGCTCCAATGCTAGAGGCAGATGGGGAGCTCTTCAACGAAAGGTGGGGTTTTCTATCACGAGCTGGCTTGTGGGATAAAAGCCACTTGATGAAACAAATTGAGAAGTATGCTGATATATATACCTCTAGGGTGTCAAATTTTTTATATTACACACCCTTCATGTATTTCCGCTCTCAGGAACAGAACCTTGCACATGATTCATATACACACTATAGTTCACAACTTGGCCAGAATGCTTCCTATTGA 1902 0.4369 MVSAPTNRPTSLKAFFNVEPARKASTVCFCSSVDPKPLNDAVFSVTPSNKSDVDYLGESTKGDLNVKLDHLEAFGIDSQAALEGPIEEVARTKAREAEDLLKDLDIPVQYTYSFCLVAPFLVAQIWLERSCGVLCSMLLSPSSSKNSPRGIFCTRTLNLRSISVIGYDMDYTLMHYNVMAWEGRAYDYCMENMKNMGFPVDGLAFDPDLVIRGLVIDKERGNLVKADRFGYVKRAMHGTKMLSTRAVSEMYGRELVDLRKESRWEFLNTLFSVSEAVAYMQMVDRLDDGAIPSDLGSFDYKGLYKAVGKALFRAHVEGRLKSEIISNPEQFVEPDSELPLALLDQKEAGKKLLLITNSDYHYTDKMMHHSFNRFLPNDMGWRDLFDIVIVSAQKPEFFQTSHPMYEVVTGEGLMRPCFKAETGGLYSGGSAQMIENSLNIHGDEILYVGDHIYTDVSQSKVHLRWRTALICRELEEEYSALIHNQGHRQALVELINQKEAVGDIFNQLRLALQRRSKGRPAQTLAATTMEDEKLTESMQKLLIVMQRLDEKIAPMLEADGELFNERWGFLSRAGLWDKSHLMKQIEKYADIYTSRVSNFLYYTPFMYFRSQEQNLAHDSYTHYSSQLGQNASY* 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01932 633 CDD HAD_cN-II 152 474 - -
Rops11g01932 633 SUPERFAMILY HAD-like 148 620 IPR036412 -
Rops11g01932 633 PANTHER 5'-NUCLEOTIDASE DOMAIN-CONTAINING 143 618 IPR008380 -
Rops11g01932 633 Gene3D - 314 501 IPR023214 -
Rops11g01932 633 FunFam Haloacid dehalogenase hydrolase 310 501 - -
Rops11g01932 633 Pfam 5' nucleotidase family 151 619 IPR008380 -
Rops11g01932 633 NCBIfam HAD-IG family 5'-nucleotidase 151 489 IPR008380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01932 Rops-Chr11 31172901 31182107 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01932 - - gmx:100815862 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g05048 2 90553914 90562104 Rops11g01932 11 31172901 31182107 PCT