Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04885 ATGGCTGTCGTAACTAGCAACCGCAAGCGCCACCGTCGGTGGAATCACAACCATCCATCTCCCAATTCTTTAACCTCCAAAAGACCCAAAGTTTCAACCATGTCCCGCAACAATCACATTCCATCCCAATTACCCTCCAATACCATAATTTCTAGAATATCTCGTTACCCTGAACCCAAGCCACCTTTGCATAGAGAGGTTCACGCCCCTTGTAGACCTCGCAAGTTTCAATTTTCAACCACACAATCGAGCTTGAAGCCTAGTGCTTTTTTTCACAGAGGGGAGATTCATAACGATATAGGCAATACGTTACATAAAAATTATCAGCGTGCGAAAAAATCTGCATTGTCTACAATTGGGTTATGGGGAAAGGGCAAGGATAATCACAAGGTTGTGGTTTCTGAAGATTCAAGTGTGAAAGAGGTTCATTTCATGGAAGAAGATGGACGAGAAGTGCGCTCTGTGGTGAAAGAACACAAGTGGAAAGAGAGTGATTTGGTTGTGACTGAGATAAAGGATTTGGATGCAAAGGTTGTAAATGGTGGGATTCGGAATCAGTCAGCTTCATCTGTGGTTTCTGAGTTGACTAATGGTAATTTGAACGTGGTTAATGCTGCAAAGATGTTGGACACTTTGTCGTTAAATCCGGAACTTGATCTTTCAAGTGTTCATGGCTACAAGAAGTTGATGGAAGCTGTTGGTAAGCGAACAGATACACTTAGTAGGTTGAACTTTGAAATTCAACTTAACGAGAAGCGCAGGTCAAAAATTGATTTGTTGCGCCGCCCAAAGAAAGAACTAGTAAAGAAAGTGCCATGGGAGCCTTTTGTTCCTCTTACGAAAGAGGAAAAAGTTGAGATTGCATGTGCCTTTTCTGCCAAGCGGAAGAAGGTATTGGTTACCCATGAGAAATCTAACATTGAGATCATGGGCGAAAAGTTTCAGTGCCTAAGGCCATGCGTGTGGTTAAATGATGAGGTGATAAATTTGTATCTGGAGTTGTTGAAAGAGAGGGAGAGAAGAGAGCCACAGAAGTTTCTGAACTGTCATTTTTTCAATACCTTTTTCTACAATAGGTTAATAAGTGGCAAGAATGGTTATGATTTCAAATCTGTGAAGAGATGGACCAGCCAAAAGAAATTGGGATATGGCCTACATGAATGTGATAAAATATTTATACCTATTCATAAACAAGTCCATTGGTGCTTGGCTGTTATCAATAAGAAAGATAAGAAATTTCAGTATCTTGACTCACTGAAAGGAATGGATACCCAAGTGCTGGAAGTGCTGGCTAGATATTTTGTAGATGAAGTTAAGGACAAGACTGGAGAAGACATCAACGTAAGTTCTTGGGAAAAAGAATTTGTTGAAGACCTTCCAGAACAGGAGAATGGGTTTGATTGTGGGATGTTTATGATCAAGTATGTTGACTTTTATAGCAGAAACCTGGGGCTATGTTTCAATCAGGAACACATGCCTTACTTCCGGCTTAGAACAGCTAAGGAAATCTTGAGATTGAAAGCTGACTAA 1530 0.4059 MAVVTSNRKRHRRWNHNHPSPNSLTSKRPKVSTMSRNNHIPSQLPSNTIISRISRYPEPKPPLHREVHAPCRPRKFQFSTTQSSLKPSAFFHRGEIHNDIGNTLHKNYQRAKKSALSTIGLWGKGKDNHKVVVSEDSSVKEVHFMEEDGREVRSVVKEHKWKESDLVVTEIKDLDAKVVNGGIRNQSASSVVSELTNGNLNVVNAAKMLDTLSLNPELDLSSVHGYKKLMEAVGKRTDTLSRLNFEIQLNEKRRSKIDLLRRPKKELVKKVPWEPFVPLTKEEKVEIACAFSAKRKKVLVTHEKSNIEIMGEKFQCLRPCVWLNDEVINLYLELLKERERREPQKFLNCHFFNTFFYNRLISGKNGYDFKSVKRWTSQKKLGYGLHECDKIFIPIHKQVHWCLAVINKKDKKFQYLDSLKGMDTQVLEVLARYFVDEVKDKTGEDINVSSWEKEFVEDLPEQENGFDCGMFMIKYVDFYSRNLGLCFNQEHMPYFRLRTAKEILRLKAD* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04885 509 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 21 502 - -
Rops2g04885 509 MobiDBLite consensus disorder prediction 1 17 - -
Rops2g04885 509 Gene3D Adenoviral Proteinase; Chain A 276 507 - -
Rops2g04885 509 ProSiteProfiles Ubiquitin-like protease family profile. 307 479 IPR003653 GO:0006508|GO:0008234
Rops2g04885 509 SUPERFAMILY Cysteine proteinases 275 507 IPR038765 -
Rops2g04885 509 MobiDBLite consensus disorder prediction 1 61 - -
Rops2g04885 509 MobiDBLite consensus disorder prediction 18 53 - -
Rops2g04885 509 FunFam Ubiquitin-like-specific protease ESD4 266 507 - -
Rops2g04885 509 Pfam Ulp1 protease family, C-terminal catalytic domain 322 503 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04885 Rops-Chr2 88118400 88124613 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04885 K08592 - gmx:100805645 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04885 2 88118400 88124613 Rops2g04885 2 88118400 88124613 ECH
Rops2g04885 2 88118400 88124613 Rops11g01553 11 23685356 23692305 PCT