Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01553 ATGGGTGTGATGACTAGCAATCGCAAACGCCCAGAAGAATGCATGAACGTCAATTACATCACCATTTCTCCATCTTCAGATTCCCAAAGAAAAAGACCCAAATTTTCATCCTCCACTCCGACCCGACCCGTTTCAACCTCGAACGGCATCGTTTCGAGGATTTCCCGGTACCCAGAGTCGAAGCCACCGTTGGTTCGTGAGGTACACGCGCCGTGCAGGCCACGAAAATTCGGACTTTCGAGAACACAATCGAGGTTCGTCGCTAATAGCGAAAACGACGACGAAATGGGCAATATTCTGGTGGGAAAATACCAAAAGGCCAAGCATTCTGCATTGGCGAAATGCAGATTCTTGACCCAAAAGGGCAAAGAGGTAATTGACGTGGAAGCTGAGAGTAGTGGGTACGAGGTTTCGGAAGATTCGGGTGTTGAAGAGGTGGTTGAGGTTCATGATTTGGATGCAAAGGTTGAGGACGGTGTCGTTTTGAGGAAGTCAACGTCGTCACCGGATTCTGCGTTGACCAATAATAACGGTAACTTGAAGGTGGTGAGTGATGTGAAAATGTGGGATTCTGAGATGCAAATGCATGATTTTTCGAGTGTTCATGTCTACAAAAAGTTGCTTAAGGATGCTTTCAGGCGAGATGACACGATTCAGAGGCTGGATTTTGAAATTGAACTGAATGAGAGACGCAGGGAAACATATAATTTGTTGCGTCCTAAGAAGGAATTGGTAGAGGAAGTGCCGCAGGATCCTTTTGTGGCTCTTACAAAGGAGGAAGAAAATGAGGTTGCACGTGCCTTTTCTGCCAATCGGAAGAAGAACTTGGTTACCCATGAGAATTCTAACATTGAGATCACAGCAGAAAAGTTTCGGTGCCTTGGCCCACGTGCATGGTTAAATGATGAGGTAATAAATTTGTATCTCGAGTTGCTGAAAGAGAGGGAGAAAAGAGAACCACAGAAGTTTCTGAAATGTCATTTTTTCAATACCTTTTTCTACAAAAGGTTAATAAGTGGCAAGAATGGTTATGATTTCAACTCTGTTCGTAGATGGACGAGCCAACGGAAATTGGGATATGGCCTGTTAGAATGTGATAAAATTTTTTTACCTATCCATCAGGAGATCCATTGGTGCTTGGCTGTTATCAATAAGAAAGATAAGAAATTCCAGTATCTTGACTCATTGAAAGGAAGGGATAACCAAGTGCTAAAAGTGCTGGCTAGATATTTTGTGGATGAAGTGAAGGACAAGACTGGAAAAGATATTGATGTAAGTGCTTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAGCAGGAAAATGGGTTTGATTGTGGGGTGTTTATGATCAAATATGCGGACTTTTATAGCAGAGGCCTGGAGCTGTGTTTTAACCAGGAACACATGTCTTACTTCCGGCTTAGGACTGCTAAGGAGATCTTGAGATTGAGAGCTGACTAA 1461 0.4333 MGVMTSNRKRPEECMNVNYITISPSSDSQRKRPKFSSSTPTRPVSTSNGIVSRISRYPESKPPLVREVHAPCRPRKFGLSRTQSRFVANSENDDEMGNILVGKYQKAKHSALAKCRFLTQKGKEVIDVEAESSGYEVSEDSGVEEVVEVHDLDAKVEDGVVLRKSTSSPDSALTNNNGNLKVVSDVKMWDSEMQMHDFSSVHVYKKLLKDAFRRDDTIQRLDFEIELNERRRETYNLLRPKKELVEEVPQDPFVALTKEEENEVARAFSANRKKNLVTHENSNIEITAEKFRCLGPRAWLNDEVINLYLELLKEREKREPQKFLKCHFFNTFFYKRLISGKNGYDFNSVRRWTSQRKLGYGLLECDKIFLPIHQEIHWCLAVINKKDKKFQYLDSLKGRDNQVLKVLARYFVDEVKDKTGKDIDVSAWEKEFVEDLPEQENGFDCGVFMIKYADFYSRGLELCFNQEHMSYFRLRTAKEILRLRAD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01553 486 MobiDBLite consensus disorder prediction 1 58 - -
Rops11g01553 486 ProSiteProfiles Ubiquitin-like protease family profile. 284 456 IPR003653 GO:0006508|GO:0008234
Rops11g01553 486 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 56 479 - -
Rops11g01553 486 FunFam Ubiquitin-like-specific protease ESD4 243 484 - -
Rops11g01553 486 MobiDBLite consensus disorder prediction 18 54 - -
Rops11g01553 486 SUPERFAMILY Cysteine proteinases 252 484 IPR038765 -
Rops11g01553 486 Gene3D Adenoviral Proteinase; Chain A 243 483 - -
Rops11g01553 486 Pfam Ulp1 protease family, C-terminal catalytic domain 299 480 IPR003653 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01553 Rops-Chr11 23685356 23692305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01553 K08592 - gmx:100780703 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04885 2 88118400 88124613 Rops11g01553 11 23685356 23692305 PCT