Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04874 ATGGATGCAAAGTCTGCTCAAGTTACCTCTGAACCATTGAAGTATCAGACATGGTTCTTGAAAGTTTCTATCCACTGTGAAGGTTGCAGGAGGAAAGTAAAGAAAGTTCTACAGAGCATTGATGGTGTTTATACCACTACAATAGATCCACAACAACAGAAAGTAACAGTCACTGGAAGTGTTGGTGTTGAGATTCTGATAAGGAAACTTGTCAAAGCTGGAAAACACGCCGAGGTTTGGCCGGAGAATCTCGCCGCCGGGAAGGGAAAGACCCCCAACAATGTGAAGAAGAAGAAGAGTGATCAAAGAGACCCAGAAAGCGTTGAAAACCATTCTGCAAATGTGGAATCAAACCTCAGCTCTGGCAAAAACAGAGGAATTGAAAGTGCTGATAAGTGCAAAAGTGAAAGTAAGAGCAGCAACTCAAAAAATGGAGCTAACTCGCCGGAAAAGTCTTCGGCAGGTGGTCATGCAGCGGAACCGGAGCACAAGGGTGGTGGTCAAAGTGAAGGAGGAACCGGAAAAAGTGGTGGAGGAGATTCTGGTAAGAAGAAGAAAAATAAATCTCAGAGTGGTGGTAATGGTAATGGAAGCAATGGGTTGAGTTCAGTATCATCAGGCAATGCAGCTGCACACACTGGATCACAGTTCCAGTGTTCTGGCCAGGTTGTGGGCCAGATGAATCTCAGCCCTACACGTCAGCAATCCTACCCATATCCAGAAACCTATTATCCTCCTTTGGTCTATCTTGCAAATTACAACAGATTCTGTCCCATGGGAAGAATGAGTGATCCCTCTTACTATGTTCCTTCGGTACCCTACATGTGTGCAGGCTTGGACCATGACCCCTATCAGGTGCAATCACCACCGTTGATTTCCTTCGAGATCTTCAGTGATGAAAATGCTAATGGTTGTTCTATTGTGTGA 927 0.4509 MDAKSAQVTSEPLKYQTWFLKVSIHCEGCRRKVKKVLQSIDGVYTTTIDPQQQKVTVTGSVGVEILIRKLVKAGKHAEVWPENLAAGKGKTPNNVKKKKSDQRDPESVENHSANVESNLSSGKNRGIESADKCKSESKSSNSKNGANSPEKSSAGGHAAEPEHKGGGQSEGGTGKSGGGDSGKKKKNKSQSGGNGNGSNGLSSVSSGNAAAHTGSQFQCSGQVVGQMNLSPTRQQSYPYPETYYPPLVYLANYNRFCPMGRMSDPSYYVPSVPYMCAGLDHDPYQVQSPPLISFEIFSDENANGCSIV* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04874 308 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
Rops2g04874 308 CDD HMA 20 78 IPR006121 GO:0046872
Rops2g04874 308 MobiDBLite consensus disorder prediction 82 212 - -
Rops2g04874 308 MobiDBLite consensus disorder prediction 111 125 - -
Rops2g04874 308 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 10 307 - -
Rops2g04874 308 MobiDBLite consensus disorder prediction 94 110 - -
Rops2g04874 308 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Rops2g04874 308 MobiDBLite consensus disorder prediction 188 212 - -
Rops2g04874 308 Gene3D - 14 79 - -
Rops2g04874 308 Pfam Heavy-metal-associated domain 22 75 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04874 Rops-Chr2 88017405 88018795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04874 - - tpra:123882121 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04874 2 88017405 88018795 Rops11g01562 11 23828248 23829977 PCT