Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01562 ATGGATGCAAAAACTGCTGAAGCTGCTTCAGAACCTTTGAAGTACCAGACATGGTTCTTGAAAGTTCCTATCCACTGTGAAGGTTGCAGGAGGAAAGTAAAGAAAGTTCTGAAGAATATTGATGGTGTTTTCACTGCAACAATAGACCAACAACTGCAGAAAGTAACAGTCACTGGAAGTGTTGGTGTTGAGACCCTTCTCAGGAAACTGGTCAGAGCCGGAAAACACGCCGAGATTTGGCCGGAGAATCTCGACGGGAAGGGGAAAAACTCCGGCAAGGAGAAGAAAAAGAATGAGAATGGACCAAGAGAACCAAAAAGCTTGGAAAACAAGGGAACTGAAAGTGCTGCCAAAAACAAGAGCAGCAACTCAAAAACCGGCAACGACTCACCGGAAAATTCTCCGGACGGAAACCATGTTCCCCCAGAGGGTGGTAAGAACGAAGGTGGTGGAGGGGGTTCCGGGAAGAAGAAGAAAAAGAAAGCTCAAAGTGGTTGCAATGGAAGCAATGGTTTGAGTTCAGTGTCCAAGAGTGCATGTGCACCTCAGCACACTGGATTCCAGTTCCAGAATCCTGGGGCCCAGCAAATGGGCCAAGTGAATCTCAGCCCTACACGTCAGCAATCATTCTCGTACCCAGACACTGGTTATCCTCCAATGGTTTATTTTGCAACTTACAACAACAGATTATATCCCATGGGAAGAAGTGGGGTTCCTTCTTACTATGTTTCATCTTCACCCTACATGTGTGCAGGCTTAGACCAAGATGGTACTTATCAATTTCAATCAGCACCGTTGGTTTCCTTTGAGATCTTCAGTGATGAAAATGCTAATGGTTGTTCTGTTATGTGA 852 0.4554 MDAKTAEAASEPLKYQTWFLKVPIHCEGCRRKVKKVLKNIDGVFTATIDQQLQKVTVTGSVGVETLLRKLVRAGKHAEIWPENLDGKGKNSGKEKKKNENGPREPKSLENKGTESAAKNKSSNSKTGNDSPENSPDGNHVPPEGGKNEGGGGGSGKKKKKKAQSGCNGSNGLSSVSKSACAPQHTGFQFQNPGAQQMGQVNLSPTRQQSFSYPDTGYPPMVYFATYNNRLYPMGRSGVPSYYVSSSPYMCAGLDQDGTYQFQSAPLVSFEIFSDENANGCSVM* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01562 283 MobiDBLite consensus disorder prediction 81 113 - -
Rops11g01562 283 CDD HMA 20 78 IPR006121 GO:0046872
Rops11g01562 283 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 9 283 - -
Rops11g01562 283 MobiDBLite consensus disorder prediction 164 178 - -
Rops11g01562 283 MobiDBLite consensus disorder prediction 114 135 - -
Rops11g01562 283 Gene3D - 14 79 - -
Rops11g01562 283 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Rops11g01562 283 MobiDBLite consensus disorder prediction 81 178 - -
Rops11g01562 283 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
Rops11g01562 283 Pfam Heavy-metal-associated domain 21 73 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01562 Rops-Chr11 23828248 23829977 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01562 - - gmx:102661650 317.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01562 11 23828248 23829977 Rops11g01562 11 23828248 23829977 ECH
Rops2g04874 2 88017405 88018795 Rops11g01562 11 23828248 23829977 PCT