Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04870 ATGGAACACAGAACCATAGAACTGAACATCGCATCAGCGAAAGACCTCAAAGATGTGAACCTCTTCACCAAGATGGACGTTTACGCCGTCGTTTCACTCTCCGGTGATCCCCACAAGACCAAGACCAAGACCCCCGTCGACAGAGAAGGCGGAGTCAACCCCACATGGAATTTCCCCGTCAAACTCTCCGTCAATGAATCACTCGCACGACAGAACCGTTTGACCCTCGAAATCAAGCTCCGTTGCCAGCGCACCCTCTCCACCGACAAGGACATAGGCCAAGTCCTCGTACCTGTCAAGGAGCTTCTAGATCAACCCGCCGACGGAAAATCGTTTCAGCATGTCAGTTACCAGGTCAGAAAACCATCTGGAAAGGCACAAGGATCCTTGAATTTCTCCTACAAATTCGGTGAACAAAAACCAACTGCTCCGGCGAAGGCGGAGCCTGTAATGGCTTATCCTGCTCCGGCGGCGGGATCCGCTTCTGCGCCATATGCGGCGTCGTACCCTCCTCCTCCTCCGCAGCCGCACTATGCCGCTGGATATGGGTACCCACAGCCGGCGCCGTATGGTGGGTACCCACAGAATCAACCGGGTTATGGGTATCCACCACAACCCGGTTACGGGTACCCGCCTCAAACCGGTTACGGGTATGCTCCTCCGGTTCAGAGACCGGCGAAGAATAATTTTGGAATGGGATTGGGAGCTGGGTTGCTTGGTGGAGCAGTGGGTGGGCTTTTGATTGGGGATATGATATCTGGTGCAGGTGCTTATGATGCTGGTTTTTGA 789 0.5412 MEHRTIELNIASAKDLKDVNLFTKMDVYAVVSLSGDPHKTKTKTPVDREGGVNPTWNFPVKLSVNESLARQNRLTLEIKLRCQRTLSTDKDIGQVLVPVKELLDQPADGKSFQHVSYQVRKPSGKAQGSLNFSYKFGEQKPTAPAKAEPVMAYPAPAAGSASAPYAASYPPPPPQPHYAAGYGYPQPAPYGGYPQNQPGYGYPPQPGYGYPPQTGYGYAPPVQRPAKNNFGMGLGAGLLGGAVGGLLIGDMISGAGAYDAGF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04870 262 Gene3D C2 domain 1 152 IPR035892 -
Rops2g04870 262 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 139 IPR035892 -
Rops2g04870 262 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Rops2g04870 262 Pfam C2 domain 5 110 IPR000008 -
Rops2g04870 262 CDD C2_SRC2_like 5 132 IPR044750 GO:0006952
Rops2g04870 262 PANTHER INGRESSION PROTEIN FIC1 1 249 - -
Rops2g04870 262 SMART C2_3c 5 111 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04870 Rops-Chr2 87962317 87963261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04870 - - gmx:100784458 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04870 2 87962317 87963261 Rops2g04870 2 87962317 87963261 ECH
Rops2g04870 2 87962317 87963261 Rops11g01564 11 23885378 23886244 PCT