Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g01564 ATGGAATTCAGGAACTTAGAACTCAACATCATATCTGCAAAGGATCTCAAAGATGTTAATCTCTTTTCCAAGATGGATGTATACGCCGTCGTTTCAGTCACCGGTGACCCTCTTTACCCTCAGAGCGCCACCACCCACGTCCACAAAGACAGCGGCACAAGCCCCACGTGGAACTTTCCGGTGAAATTCATGGTCAACGAATCGCTGGTGAAACAGAACCGTTTATCCCTTGAAGTAAAGCTCATCTCCGACCGCACCCTCGGCGACACCGTCATCGGAACCGTCCATGTTCCTCTCAAGGAACTCCTCGACAACACCGTCGACGGTGACTCCTTCCGGCAAGTAACTTACCAGGTGAGAAAATCTTCAGGGAAGACCAAAGGCTCATTCAACTTCTCCTACAAATTTGGCCAACGGGTCGACGCTCCTGCGACAAAGGCGGCGCCGAAGCAGGAGCCGGTGATGGCTTATCCTCCTCCAGCGGCGGGATCTAGTTCATACCCTCCGCCGCAGCAGCAGCATGCGGCTGGTTATGGATATCCTCCGCCGCCGCCGGCGTATGGCGGTTATCCTCAGGGTCAACCTGGATATGGTTACCCGCCACAACAGGGTCATGGGTACCCACCACAACAGGGTCACGGGTACCCACCACAAGCAGGTTATGGGTACCCGCAACAACCGGGTTATGGGTACCCACCGGTTCAGCAACCGCAGAAGAAGAAGAATAAGTTTGGGATGGGTTTGGGAGCAGGGTTGCTCGGAGGTGCTTTGGGCGGGATGTTGATTGGGGATATGGTATCTGATGCTGCTGATTATGATAATGGATATGATGCTGGGTTTGATGATGCTGGTGGATTTGATTTTTAA 867 0.5294 MEFRNLELNIISAKDLKDVNLFSKMDVYAVVSVTGDPLYPQSATTHVHKDSGTSPTWNFPVKFMVNESLVKQNRLSLEVKLISDRTLGDTVIGTVHVPLKELLDNTVDGDSFRQVTYQVRKSSGKTKGSFNFSYKFGQRVDAPATKAAPKQEPVMAYPPPAAGSSSYPPPQQQHAAGYGYPPPPPAYGGYPQGQPGYGYPPQQGHGYPPQQGHGYPPQAGYGYPQQPGYGYPPVQQPQKKKNKFGMGLGAGLLGGALGGMLIGDMVSDAADYDNGYDAGFDDAGGFDF* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g01564 288 CDD C2_SRC2_like 6 132 IPR044750 GO:0006952
Rops11g01564 288 Pfam C2 domain 5 110 IPR000008 -
Rops11g01564 288 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 138 IPR035892 -
Rops11g01564 288 Gene3D C2 domain 4 137 IPR035892 -
Rops11g01564 288 SMART C2_3c 5 111 IPR000008 -
Rops11g01564 288 MobiDBLite consensus disorder prediction 143 242 - -
Rops11g01564 288 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Rops11g01564 288 PANTHER INGRESSION PROTEIN FIC1 1 264 - -
Rops11g01564 288 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g01564 Rops-Chr11 23885378 23886244 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g01564 - - lja:Lj6g3v1444480.1 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g01564 11 23885378 23886244 Rops11g01564 11 23885378 23886244 ECH
Rops2g04870 2 87962317 87963261 Rops11g01564 11 23885378 23886244 PCT