Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04605 ATGAAGTTCATGAAACTGGGGACAAGGGCAGATACTTTCTACACTGAACAAGCTACCAGGACTCTGATATCAGATATAGCTGCAGACCTTGTAATACAAATCAATGATGTTACTTATCTGCTACACAAGCTGCAGTTTCCACTTCTTCCAAAATGTGGCCTCTTACAGAGGCTTTGCTATGATTCTAGTGATTCTGAGAGTGTCTCTCTAGAGCTTCATGATATACCTGGAGGAGAAGATGCTTTTGAACTATGTGCTAAGTTCTGTTATGGAATTTCAATCAACATTAGTGCCCATAACTTTGTATCTGCACTCTGTGCTGCCAAGTTCCTTAGAATGAATGACTCCATTGAGAAGGGAAACTTTGTGGGAAAACTTGAGGCTTTCTTCAATTCATGCATTCTTGAAGGTTGGAAGGATTCCATAGCAACACTTCAGACTACTGCTACATTACCAGAGTGGTCTGAGAATCTCGGTATTGTCAGAAAGTGCATTGATTCAATTATTGAGAAAATTCTCACACCCCCACAACAGGTCAAATGGTCCTTCACATATACCAGGCCTGGTTATACAAAAAAACAGCACCATTCAGTCCCAAAGGATTGGTGGACTGAGGATGTTGCTGATCTTGACATAGATCTTTTCAGGTGCATAATAATGGCTATTAGATCAACATATGTGCTCCCTCCACAGCTTATTGGTGAAGCTTTGCATGTCTATGCCTGCCGGTGGCTACCAGGCATCACAAAGCTTAAAAGTTCAGGCAGTTCAGCATCTCAAACTGAAGAATCTAAGGAGAAAAACCGAAAAATTCTTGAAACAATTGTAAGCATGATTCCTGCAGATAGAGGGTCTGTTTCAGTTGGCTTCTTGTTTAGACTTCTCAGCATTTCAATTCATTTGGGTGCCTCCTCAGTGATAAAGACAGAGCTAATAAGGAGAGCCAGCTTACAGTTTGAGGAGGCAACAGTGAGTGACCTGCTTTATCCTTCAACATCATCTTCTTCTGACCAGAATTATTATGATATAGAGTTAGTTCTAGCAGTGTTGGAAACTTTCTTGAAGCTTTGGAAAAGAATGTCCCCTGGTGCTGTGGATAACAGCTACTTTTTAAGATCAATCAGAAATGTTGGCAGGCTCATTGATTCCTATCTTCAAGTGGTCGCAAGGGATGATAATATGCAAGTGTCCAAGTTTGTATCTCTTGCTGAAACTGTTCCAAGCATTGCCCGACTAGATCATGATGATCTGTACCAGGCAATTAACATCTATCTTAAGGTGCATCCTGACCTGAGTAAAACTGACAAGAAGCGCCTATGTGGGATTTTAGACTGCCAAAAACTGTCCCCAGAAGTGCGTGGCCATGCAGTAAAAAATGAGCTTCTGCCATTAAGAACAGTAGTGCAGCTTCTCTACTTTGAACAAGAGAAAGGGTCTTCTAAGACAACCACCACAGGTCAAAAACTTGCAAAACCACATGAGATACTTCTAGGAGCAAAACATAGACCAGCTACAAGAGATAGCCAAAGCAAGCAATCATTAGGCCTTGATAAAGAAGAGGTCAATGGAGAAGTAGTCACAAAGGATCACCACAAAACTAAAAGATCAGATGGTAAGTTGCCATTGGACTTAGAAAGAAAGATGGTTATAAGTGGAGACATTGGAGAGACAGAGTCAGAGAAGGTGAGGGGAGTCAAAGGTGAAAGTACTTCTTCAAGTTGCAAGTTGGATTTGGATCCTAAGAAAATCATAAGAAGGGCAAGAAGTAAATCAGAACATAGTGTGAGAAGGGCTTAA 1797 0.4107 MKFMKLGTRADTFYTEQATRTLISDIAADLVIQINDVTYLLHKLQFPLLPKCGLLQRLCYDSSDSESVSLELHDIPGGEDAFELCAKFCYGISINISAHNFVSALCAAKFLRMNDSIEKGNFVGKLEAFFNSCILEGWKDSIATLQTTATLPEWSENLGIVRKCIDSIIEKILTPPQQVKWSFTYTRPGYTKKQHHSVPKDWWTEDVADLDIDLFRCIIMAIRSTYVLPPQLIGEALHVYACRWLPGITKLKSSGSSASQTEESKEKNRKILETIVSMIPADRGSVSVGFLFRLLSISIHLGASSVIKTELIRRASLQFEEATVSDLLYPSTSSSSDQNYYDIELVLAVLETFLKLWKRMSPGAVDNSYFLRSIRNVGRLIDSYLQVVARDDNMQVSKFVSLAETVPSIARLDHDDLYQAINIYLKVHPDLSKTDKKRLCGILDCQKLSPEVRGHAVKNELLPLRTVVQLLYFEQEKGSSKTTTTGQKLAKPHEILLGAKHRPATRDSQSKQSLGLDKEEVNGEVVTKDHHKTKRSDGKLPLDLERKMVISGDIGETESEKVRGVKGESTSSSCKLDLDPKKIIRRARSKSEHSVRRA* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04605 598 ProSiteProfiles NPH3 domain profile. 201 477 IPR027356 -
Rops2g04605 598 MobiDBLite consensus disorder prediction 555 577 - -
Rops2g04605 598 PANTHER OS12G0117600 PROTEIN 24 557 IPR043454 -
Rops2g04605 598 Pfam NPH3 family 201 451 IPR027356 -
Rops2g04605 598 Gene3D Potassium Channel Kv1.1; Chain A 13 120 IPR011333 -
Rops2g04605 598 MobiDBLite consensus disorder prediction 499 540 - -
Rops2g04605 598 SUPERFAMILY POZ domain 14 116 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04605 Rops-Chr2 83983849 83989496 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops2g04605 8 475 EF-hand Containing Proteins AT3G44820 31.890 3.55e-78 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04605 - - gmx:100795262 1009.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops2g04605 2 83983849 83989496 Rops11g01192 11 17464088 17471179 PCT