Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops2g04528 ATGAAGAGCCTAGTGGTGGTGATTCTTGTTGCACTTTACCTCGTTAACTATTCATCCAGCCTCAAGCTGGGAGAAACTTGTGGGTCAGAGAACAAATGCGACACTGGTCTCCATTGTGATACATGCCCTGCAAATGGGAATACAAGACCTAGATGCACTAGGATCCAACCTACAAGTCCCACTTCAAAAGTGAAAGGTTTGGCGTTTAACCGGTATTCGTGGCTCACCACCCATAACTCTTTTGCTGAATCGGGTGTTAAATCAGACACGGGATCTTCTATCTTATCATCCACGAACCAGGAAGATACGGTTGCTCATCAACTCAGTAATGGTGTTCGAGGCCTAATGTTAGATATGTATGACTTTGAAAACGATATCTGGTTATGTCACTCCTTCGCAGGCGAATGTTTCAATGCCACTTCATTTCAACCTGCTATAAATGTGCTCAAAGACATCCAATCATTTTTGGAAGCAAATCCATCAGAAATTGTGACCATCTTCATTGAAGACTATGTGACATCTTCCCAGGGGCTTACTAAGGTGTTCAATGCTTCAGGGCTGAGCAAGTACTGGTTCCCAGTGTCTAGAATGCCTAAAAATGGTGGAGATTGGCCAACTGTGGATGACATGGTACAGAAGAATCAACGCTTGATTGTTTTCACTTCCAAATCATCTAAAGAAGCTTCTGAGGGCATTGCTTACCAGTGGAAATATGTAGTAGAAAACCAATATGGAGATGATGGAATGAAAGCTGGTTCTTGTCCAAATCGTGCAGAATCGTCAGCTATGAACACGAAATCAAGGTCCCTGGTTTTGATGAACTATTTTCACACTGATCCAAATGCAAGTCTGGTTTGCGCTGACAATTCGGCTCCATTACTTAACATGATGAAGACTTGCCACGATGCTGCTAGCAACCGGTGGCCAAATTTTATTGCTGTTGATTTTTACCAGAGGAGTGATGGAGGTGGAGCCCCAGAAGCTGTTGATGAGGCCAATGGTCATTTGACTTGTGGATGTGACAACATTGCCTACTGCAAGGCAAATGCCACATATGGAACATGCGATGTGCCTCCAATTTCTCCACCGCCGCCTGCGGCAGACGCCACCGTCACCGCCACCGATACAACCACCGTTGCTGGAGGAAACGAGCCACCATATGACAATGCTTTTATGGACACGCCAGCAAGGTTGCTACAATCGTTTGGGATAATTTTGGGAATGACCACTTTCTTGACTTGGTTCTAG 1248 0.4487 MKSLVVVILVALYLVNYSSSLKLGETCGSENKCDTGLHCDTCPANGNTRPRCTRIQPTSPTSKVKGLAFNRYSWLTTHNSFAESGVKSDTGSSILSSTNQEDTVAHQLSNGVRGLMLDMYDFENDIWLCHSFAGECFNATSFQPAINVLKDIQSFLEANPSEIVTIFIEDYVTSSQGLTKVFNASGLSKYWFPVSRMPKNGGDWPTVDDMVQKNQRLIVFTSKSSKEASEGIAYQWKYVVENQYGDDGMKAGSCPNRAESSAMNTKSRSLVLMNYFHTDPNASLVCADNSAPLLNMMKTCHDAASNRWPNFIAVDFYQRSDGGGAPEAVDEANGHLTCGCDNIAYCKANATYGTCDVPPISPPPPAADATVTATDTTTVAGGNEPPYDNAFMDTPARLLQSFGIILGMTTFLTWF* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops2g04528 415 PANTHER UNCHARACTERIZED 32 347 - -
Rops2g04528 415 CDD PI-PLCc_At5g67130_like 58 333 - -
Rops2g04528 415 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 69 176 - -
Rops2g04528 415 SUPERFAMILY PLC-like phosphodiesterases 66 335 IPR017946 GO:0006629|GO:0008081
Rops2g04528 415 Gene3D Phosphatidylinositol (PI) phosphodiesterase 61 333 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops2g04528 Rops-Chr2 82687887 82704798 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops2g04528 - - gmx:100809640 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops3g00589 3 7423447 7426983 Rops2g04528 2 82687887 82704798 ECH
Rops2g04528 2 82687887 82704798 Rops2g04528 2 82687887 82704798 ECH